Pseudomonas frederiksbergensis: PFAS1_27165
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Entry
PFAS1_27165 CDS
T04786
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFAS1_27165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfk03400
]
PFAS1_27165
Enzymes [BR:
pfk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PFAS1_27165
DNA repair and recombination proteins [BR:
pfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFAS1_27165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
APV42811
LinkDB
All DBs
Position
5831777..5832394
Genome browser
AA seq
205 aa
AA seq
DB search
MPDAYLPATEFLSSIDEDWRRHIAAIGPCLHQPHAARDPYESLVRAIAYQQLHAKAGDAI
VGRLIALFGTGAFPRPEQIVATGFNQLRSCGFSASKIATIQGIAQAALDGVVPDYAEAMA
MADEALIERLITLRGVGRWTVEMLLIYSLERPDILPADDFGVREGYRRLKGLEVQPTRKQ
MIEIGLAWSPYRTVASWYLWRMTGK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgcctacctgcccgccaccgagtttctatcgtccatcgatgaggactggcgc
cgccacatcgccgccatcggcccttgcctgcatcaaccccatgcggcacgcgatccttat
gagtcactggtgcgggcgattgcctatcagcaactgcacgccaaggccggtgatgcgatt
gtcggtcggttgatcgcgttgtttgggacgggcgcgttcccgaggcctgagcagattgtc
gcgaccgggttcaatcaactgcgcagttgcggcttttccgccagcaagatcgcaaccatt
cagggcattgcccaagcggcgctggacggtgtggtgccggattacgctgaggcaatggcg
atggcggatgaagcgctgatcgagcgattaattaccttgcgcggggttgggcgctggacg
gttgagatgttgctgatctacagcctggagcggccggatattttgcccgccgatgacttt
ggcgtgcgtgagggatatcgccggctcaaggggctggaggtgcagccgacgcgcaagcag
atgattgagatcgggttggcgtggagcccttatcggacggtggcttcctggtatttgtgg
cggatgaccggcaagtag
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