Pseudomonas frederiksbergensis: PFAS1_27590
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Entry
PFAS1_27590 CDS
T04786
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00300
Lysine biosynthesis
pfk00470
D-Amino acid metabolism
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
pfk01120
Microbial metabolism in diverse environments
pfk01230
Biosynthesis of amino acids
Module
pfk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFAS1_27590
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFAS1_27590
Enzymes [BR:
pfk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PFAS1_27590
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
APV42885
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Position
5928420..5929235
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AA seq
271 aa
AA seq
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MPLSFQKMHANGDDFVVVDSRNVANPMTSALARRMGDRNRGVGFNQLAVVLDCDDADARL
MFWNADGSALDVCGSATRGAAHMLMRESNSTSIALRTNRGLLTCERTSTGAISVNMGEPL
FGWSDIPLALELDTAVLPLTGDPTACSMGNPHCTYFVEDLTAIDIATIGPTIETNPLFPL
RTNVHFVQIIDRKHIRLRIWERWGGIPLGSGSCSCGAAVNGIRRGLLDNSVEVECDGGTV
TVQWDGVGPVFLIGPVETTFSGVFMDGLHFL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgagttttcaaaaaatgcacgctaatggcgatgacttcgttgtagtggactca
cgaaacgtggccaacccaatgacaagtgccctcgctcggcgaatgggtgatcgcaaccga
ggcgtcggattcaatcaacttgcggtggtgctcgattgcgatgatgccgatgcgcgtttg
atgttttggaatgcagatggctccgcactggatgtttgtggcagtgcaacaaggggcgcc
gcgcatatgctgatgcgcgaatcgaacagcacttcgatagcgctccgaaccaaccgtggt
ctactcacttgcgaacgaacttcaaccggcgcaatttccgtcaacatgggagagccgctt
ttcggctggtcggatattcccctggctctggaactggacactgctgttttgccacttacc
ggtgacccaacagcttgcagcatgggaaatccgcactgcacctatttcgtggaggatcta
acagccatcgatatagcgaccatcggcccgacaattgaaaccaaccccctgtttccactc
aggacgaacgtgcatttcgtccagatcatcgaccgaaaacatattcggttgcgcatttgg
gagcgctggggtggcattccgctcggttcaggttcctgctcttgtggtgccgctgttaac
ggaattcgtcgtggcttgttagataactccgttgaggttgaatgtgatggcggaaccgta
acggttcaatgggatggcgtgggacctgtgtttctcatcggaccggtcgagacgactttt
tcgggagtattcatggatggtttgcactttttatag
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