KEGG   Pseudomonas frederiksbergensis: PFAS1_27590
Entry
PFAS1_27590       CDS       T04786                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk00300  Lysine biosynthesis
pfk00470  D-Amino acid metabolism
pfk01100  Metabolic pathways
pfk01110  Biosynthesis of secondary metabolites
pfk01120  Microbial metabolism in diverse environments
pfk01230  Biosynthesis of amino acids
Module
pfk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PFAS1_27590
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PFAS1_27590
Enzymes [BR:pfk01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PFAS1_27590
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: APV42885
LinkDB
Position
5928420..5929235
AA seq 271 aa
MPLSFQKMHANGDDFVVVDSRNVANPMTSALARRMGDRNRGVGFNQLAVVLDCDDADARL
MFWNADGSALDVCGSATRGAAHMLMRESNSTSIALRTNRGLLTCERTSTGAISVNMGEPL
FGWSDIPLALELDTAVLPLTGDPTACSMGNPHCTYFVEDLTAIDIATIGPTIETNPLFPL
RTNVHFVQIIDRKHIRLRIWERWGGIPLGSGSCSCGAAVNGIRRGLLDNSVEVECDGGTV
TVQWDGVGPVFLIGPVETTFSGVFMDGLHFL
NT seq 816 nt   +upstreamnt  +downstreamnt
atgccgctgagttttcaaaaaatgcacgctaatggcgatgacttcgttgtagtggactca
cgaaacgtggccaacccaatgacaagtgccctcgctcggcgaatgggtgatcgcaaccga
ggcgtcggattcaatcaacttgcggtggtgctcgattgcgatgatgccgatgcgcgtttg
atgttttggaatgcagatggctccgcactggatgtttgtggcagtgcaacaaggggcgcc
gcgcatatgctgatgcgcgaatcgaacagcacttcgatagcgctccgaaccaaccgtggt
ctactcacttgcgaacgaacttcaaccggcgcaatttccgtcaacatgggagagccgctt
ttcggctggtcggatattcccctggctctggaactggacactgctgttttgccacttacc
ggtgacccaacagcttgcagcatgggaaatccgcactgcacctatttcgtggaggatcta
acagccatcgatatagcgaccatcggcccgacaattgaaaccaaccccctgtttccactc
aggacgaacgtgcatttcgtccagatcatcgaccgaaaacatattcggttgcgcatttgg
gagcgctggggtggcattccgctcggttcaggttcctgctcttgtggtgccgctgttaac
ggaattcgtcgtggcttgttagataactccgttgaggttgaatgtgatggcggaaccgta
acggttcaatgggatggcgtgggacctgtgtttctcatcggaccggtcgagacgactttt
tcgggagtattcatggatggtttgcactttttatag

DBGET integrated database retrieval system