Pseudomonas frederiksbergensis: PFAS1_27670
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Entry
PFAS1_27670 CDS
T04786
Name
(GenBank) short-chain dehydrogenase
KO
K07234
uncharacterized protein involved in response to NO
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
PFAS1_27670
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Gene cluster
GFIT
Motif
Pfam:
NnrS
PMP1_2
Defensin_2
Motif
Other DBs
NCBI-ProteinID:
APV42900
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Position
complement(5943555..5944745)
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AA seq
396 aa
AA seq
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MQVLDRRKAMAIAPLLRLAFRPFFLAGCLLAVLAIPLWLAAFNGALSGWQPAGGWLGWHR
HELLFGFGLAIIAGFLLTAVQTWTGRPGLSGRPLAALALLWLLARVAWLVNAPWPVLAVL
ELAFPLAVAALMGFTLWKVRQKRNYPIAVVLLLLAAADGLSLYGLVEGHEGWQRQGVLTG
LWLVAAMMGLIGGRVIPFFIQRGLGKVEGVTPWPWLDWLLLIGSPLVALLYAAGPALDPN
FWVGLLFAVLAAGHLVRLVRWHDRALWHVPLLWSLYLAYAWLAVACLGMALWHFGVPINP
SLAVHCLTIGAMGGLVLAMIARVSLGHTGRALEPPSGMTLAFILLNLACLSRVVLILFFP
LPALWLAGLCWTLAFALYAWRYGPMLLRARVDGHPG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgctcgaccgccgtaaagcgatggccatcgcgccgctgttacgtttggccttt
cggccgtttttcctcgccggctgcctgctggcagtgctggccattccgctctggctggcc
gccttcaatggtgcgctttccggttggcagccggcgggtggctggctgggctggcatcga
cacgaattgctgttcggattcggcttggcgattatcgcgggctttctgctgacggcggtg
cagacctggaccggtcgccccggcctcagcgggcgacccctggccgcgctggcattgctg
tggttgttggcgcgcgtggcctggctggtcaatgcgccatggccggtgctcgcggtgctg
gaattggcgttcccgctggcggtggccgcgctcatgggtttcaccttgtggaaggtgcgg
cagaaacgtaactacccgattgcggtggtgctgctgttattagcggcggccgacggcttg
tccctgtacggcctggtcgaaggtcatgaaggctggcagcgtcaaggtgtgctgaccggc
ctctggctggtggcggcgatgatggggttgatcggcgggcgcgtcattccgttcttcatc
cagcgtggcctcggcaaggtcgaaggcgtgaccccttggccgtggctggattggctgctg
ctgattggctcaccgctggtggcgttgttgtatgccgccggacctgcgcttgaccccaat
ttctgggtgggcctgttgttcgccgtgttggccgcagggcatctggtgcgtctggttcgc
tggcatgatcgcgccctctggcacgtaccgttgctgtggtcgttgtacctggcgtatgcc
tggttggcggtggcttgtctcggaatggcgctgtggcatttcggtgtgccgatcaatcca
agtctggcggtgcattgcctaaccatcggcgccatgggcggcctggtgctggcgatgatc
gcgcgggtcagcctggggcataccggccgtgcgctggagccgccgtcgggcatgacgttg
gcgttcattctgctcaacctggcgtgtctgagccgggtcgtgttgatcctgttctttcct
ctgcctgcgttgtggctggccggtctgtgttggacgctggcgtttgcgctgtacgcctgg
cgctacgggccgatgctgttgcgggcgcgggtggacggccatccaggctaa
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