Pseudomonas frederiksbergensis: PFAS1_27975
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Entry
PFAS1_27975 CDS
T04786
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk02020
Two-component system
pfk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFAS1_27975
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFAS1_27975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfk02022
]
PFAS1_27975
Two-component system [BR:
pfk02022
]
OmpR family
QseC-QseB (quorum sensing)
PFAS1_27975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
PDE8A_N
KaiA_N
Phage_integrase
y4jL_C
Motif
Other DBs
NCBI-ProteinID:
APV42958
LinkDB
All DBs
Position
6001765..6002427
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AA seq
220 aa
AA seq
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MRLLLIEDDTALGEGIQQALGREGYTVDWLQDGSSALHSLLSESFDLAVLDLGLPRMDGL
QVLRRLRDSGSNLPVLILTARDATEDRIAGLDAGADDYLIKPFDLSELKARLRALLRRSA
GRAQMLIEHAGISLNPGTQQVSYQGEPVALTPKEYQLLHELLSPPGRVMTRDHLMQLLYG
WNEEAESNTLEVHIHHLRKKFSTDLIRTIRGVGYLVEERR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttattactgattgaggatgacacggccctgggcgaaggcatccagcaggccctg
ggccgcgaaggttacaccgtcgactggttgcaggacggcagcagcgccttgcattcgctg
ctcagcgaatccttcgacctggctgtgctcgacctcggcctgccgcgcatggacgggctg
caagtattacgccgcttgcgtgacagcggctccaacctgccggttctgatcctcaccgcg
cgggacgccaccgaagaccgtatcgccgggctggatgccggggccgacgattacctgatc
aagccctttgatctgtccgaactcaaggcgcgtctgcgggccttgctgcggcgcagtgcc
ggccgcgcgcagatgctgatcgaacacgccggcatcagcctcaaccctggcacccagcaa
gtcagctatcagggcgaaccggtggcgctgacacccaaggaatatcagctgcttcacgaa
ttgctctcgccaccgggccgggtcatgacccgcgatcacttgatgcagttgctttacggc
tggaacgaggaagccgaaagcaacaccctggaagtgcacatccaccacctgcgcaagaag
ttctccaccgacctgatccgtaccattcgcggtgtcggttacctggtggaggagcgtcga
tga
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