KEGG   Pseudomonas frederiksbergensis: PFAS1_28995
Entry
PFAS1_28995       CDS       T04786                                 
Name
(GenBank) type VI secretion protein
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PFAS1_28995
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfk02044]
    PFAS1_28995
Enzymes [BR:pfk01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PFAS1_28995
Secretion system [BR:pfk02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   PFAS1_28995
SSDB
Motif
Pfam: CagE_TrbE_VirB DUF87
Other DBs
NCBI-ProteinID: APV43348
UniProt: A0A1H4IA76
LinkDB
Position
unnamed:complement(66386..69070)
AA seq 894 aa
MRLVDKAFNKLVRNMDLSLGVQHPEGSDQDLDELVVSEMVPYDVHYDDQTVITGEDSLVQ
VIKIDGLMFDSLTSTQIKLFEERRNTVLRTVASSDFAIYVHVIRRKVIDFPEGQGGTWFS
KYFNARLRKRYVNRGFYVNEIYISLVRNRFRSGVPGLMDRAIALVTGNSAADEAGETHEA
MADSLYKAANLVLRGLSDYGATRLCIQRHPTATNGVVDREAAYQAVSRFQWKWDDFKVQL
GDHAEYDAEAVYDYLGEEYCELSSFFNYLINLEFRKIPVTELKIKEALPYARLNFRILAN
MCEIRGSTSARIGSMLSMAEWPRRTPSRMMNKFLQQPVEFIITQSFFFENRIEAESAMMD
ETRRLKVADPHKISEDDAKELAEGIRALRRGDTVNGKHHLTIFIHVPSDANTTAESRKAN
VKRLDDAVGLIEGCFVDLNVKSVREWLALETFFWSQLPGQQEALIGRRGKIKSTNFAGFA
SLHNFARGRRDGNLWGPAITAFETESGTQYNFNYHRELEGMVAGHTGVAAGTGSGKTALI
AETVSEADKALPVVYWFDMRYGATVFMMAMGGVHSILSPHNSMGWNPFKLPDTAENRAYL
IDLQIQMRECYASTATEADDIKRFKDAVNENYELPFENRRLRNVVWTYGHGALADVMAIW
HGAKGIEGANAGVFDNENDTFDLSKSRHYCFEMSELMKGGDARPELPVVMSYPLHCIEQA
MDGRPFILVLDEGQNLVKNDFWRNRIDNFIMQIRRKNGILIFITPDAKYFHSETDSIDKQ
TVTKIYLASDSVKDEDHKNLTEEEKKWLRELNPKDRKFLIRRGQESIRACFDLSSDNPDE
DLSDFIPVLSSNDVGVALMYSIIERLGTNDPEVWVPVFMAEAKANNTHNLKAIR
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgcgcctcgttgataaagcttttaataagctagtgcgaaatatggatctttcgcttggt
gtccaacatccagaagggtccgatcaggatctcgatgagttggtggtcagcgagatggtg
ccgtatgacgtgcattatgacgatcaaacagtcatcaccggcgaggattcactggtgcag
gtcatcaagattgatggcctgatgttcgactcgctcactagcacgcaaatcaagctgttc
gaagaacgccgcaataccgtgctacgcacagtggcaagcagtgattttgccatttacgtt
catgtcatccgccgtaaggtgatcgactttcccgaagggcagggcggtacttggttctcc
aagtatttcaatgcccggttgcgcaagcgctatgtgaacagaggtttctacgtcaacgag
atctatatctcgctggttcggaatcgctttcgctctggcgttccagggctcatggatcgg
gcaattgcgctggtcactggtaactcagctgcagatgaagcaggcgagacacatgaagcc
atggcggactcgctctacaaggccgcaaaccttgtactgcgaggcttgtccgactacggc
gctactcgtctgtgcatccagcgtcatccgaccgcaaccaatggtgtagttgatcgcgaa
gctgcatatcaagcagtgtcccgcttccagtggaaatgggacgacttcaaggtgcagctt
ggtgatcacgctgagtacgacgcagaagctgtttacgattacctgggcgaggaatactgc
gagctgagcagcttcttcaactacttgatcaaccttgagttccggaagatccccgtcact
gaactgaaaatcaaggaggctttgccctacgcccggttgaatttccgcatccttgcaaac
atgtgtgagattcgaggcagtacgtcagcacgcatcggttccatgttgagcatggccgaa
tggccgcgtcgtacaccgtcgcgcatgatgaacaaattccttcagcagccagttgaattc
atcatcactcagtcgtttttcttcgaaaaccgtattgaagctgaatccgcgatgatggat
gaaacccggcgtctcaaggttgcagatccacacaaaatctcggaggacgatgcaaaggaa
ctggcagagggtattcgtgctttgcgccgtggcgatacggtcaatggaaaacatcacctg
accattttcattcacgttccatcagacgcaaacactaccgccgagagccgcaaagcgaat
gtgaagcgactggatgatgcagttggtttgatcgaagggtgctttgtcgacctgaacgtc
aagtcggttcgtgagtggttggctcttgagacgttcttctggtcgcagctacctggtcaa
caagaagctcttatcggtcgccggggaaagatcaagtcaaccaactttgcgggcttcgca
tcgttgcacaactttgctcgcggacgtcgtgacggcaacctgtggggccctgcaatcact
gctttcgaaaccgaaagtggcactcaatacaacttcaactaccaccgtgaattggaaggg
atggtcgctggccacactggcgtggctgcaggcaccggctcgggtaaaaccgcattgatc
gctgaaaccgtcagtgaagcggacaaagccttgccggttgtgtactggtttgacatgcgc
tacggggccaccgttttcatgatggccatgggcggcgtccattcgatcctttccccacac
aacagcatgggttggaaccccttcaaattgcctgacacggctgagaaccgtgcctacctc
attgatctgcagatccagatgcgggagtgctacgcaagcaccgcaactgaggccgacgat
atcaagcggttcaaggatgcagtgaacgagaactacgagctgccattcgaaaatcgccgg
ttgcgcaatgtcgtatggacctacgggcacggcgccttagctgacgttatggctatttgg
catggtgccaaaggaatcgaaggtgcaaacgccggcgtttttgataacgaaaatgacact
ttcgatctcagtaagtcgcggcattactgctttgaaatgtcggagctgatgaagggcggc
gatgcacgcccggaattgccagtagtgatgagctacccattgcactgcattgagcaggct
atggatggcagacctttcattctggttttggatgaaggtcagaacctggtcaaaaacgat
ttttggcgcaatcgaattgacaatttcatcatgcagatccgccgtaaaaacgggattttg
atcttcatcaccccggacgcgaagtacttccacagtgaaaccgactccatcgacaagcag
accgtaaccaagatctacctggccagcgactcggtgaaagacgaagaccataagaacctg
acggaggaagaaaagaagtggttgcgcgagctgaacccaaaggatcgcaagttcttgatt
cgtcgcggccaggaatcgattcgtgcgtgcttcgacctgtcctccgataaccctgacgaa
gacctgtccgatttcattccggtcctgtcttcaaacgatgttggtgtggccttgatgtac
tcaatcattgagcgcctgggcaccaatgaccccgaggtctgggtgccagttttcatggca
gaagccaaggccaataacacccacaacttgaaggcaattcgatga

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