Pseudomonas protegens Pf-5: PFL_0013
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Entry
PFL_0013 CDS
T00249
Symbol
glyS
Name
(GenBank) glycine--tRNA ligase, beta subunit
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFL_0013 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfl01007
]
PFL_0013 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfl03016
]
PFL_0013 (glyS)
Enzymes [BR:
pfl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
PFL_0013 (glyS)
Amino acid related enzymes [BR:
pfl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PFL_0013 (glyS)
Transfer RNA biogenesis [BR:
pfl03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PFL_0013 (glyS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
AAY95431
UniProt:
Q4KKR8
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All DBs
Position
complement(14740..16794)
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AA seq
684 aa
AA seq
DB search
MSAQDFLVELGTEELPPKALNTLAEAFLAGIEKGLQSAGLSFQAKHVYAAPRRLAVLITQ
LATQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGVELSEIDQSGPKLRYSQSIKG
KPTASLLPTIVEDSLNDLPIPKRMRWAARKEEFVRPTQWLVMLLGDEVIDCTILAQKAGR
DSRGHRFHHPQSVRITAPANYLADLRAAYVLADANERRELISKRTAELATLQEGTAIVPA
DLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDVDGKLLPRFITVA
NIESKDPRQIIEGNEKVVRPRLTDAEFFFKQDKKQKLEDFNLRLQNVVFQEKLGSVYDKA
ERISKLAAFIAPRIGGDAQRAARAGLLSKCDLATEMVGEFPEMQGIAGYYYALNDGEPED
VALALNEQYMPRGAGAELPSTVTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAAL
GVLRILIEKKFDLDLNDAVAFAVSAFGSKVKAAGLADQVLEFIFDRLRARYEDEGVDVAT
YLSVRALKPGSALDFDQRVQAVQAFRKLPEAAALAAVNKRVSNLLSKIEGNVPTTIEAKY
FDNANEFSLYSAIQQADQAVQPMAAARQYSETLARLAALREPVDAFFEAVMVNAEDAKVR
ANRYALLARLRGLFLGVADISVLS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcaagattttctggttgaactgggcactgaagaactgccacccaaagccctg
aacaccctggccgaagcctttctggccggcatcgaaaaaggcctgcagagcgccggcctg
agcttccaggccaagcacgtatacgccgcgccacggcgcctggcggtgctgatcacccaa
ctggccacccagcagccggatcgcagcatcaacctcgacggcccgccacgccaggcagcc
ttcgatgctgaaggcaacccgacccaggcggccctcggctttgccaagaagtgcggcgtc
gaactcagcgagatcgaccagagcggcccgaaactgcgctacagccagagcatcaagggc
aagccgaccgccagcctgctgccgaccatcgtcgaagattcgctgaacgacctgccgatt
cccaagcgcatgcgctgggccgcgcgcaaggaagagttcgtgcgcccgactcaatggctg
gtgatgctgctgggcgatgaggtcatcgactgcaccatcctcgcccagaaggccggtcgc
gactcccgcggccaccgcttccaccacccgcaaagcgtgcgcatcaccgcgccggccaac
tacctggccgacctgcgtgccgcctacgtgctggccgacgccaacgagcgtcgcgagctg
atcagcaagcgcaccgcggaactggcgaccctgcaggaaggcacggcgatcgtccccgcg
gacctgctggacgaagtgactgccctggtcgaatggccggtgccactggtgtgctcgttc
gaggagcgcttcctcgaagtgccccaggaagccctgatcaccaccatgcaggacaaccag
aagtacttctgcctgctggacgtggacggcaagctgctgccgcgcttcatcaccgtggcc
aacatcgagagcaaggacccgcgccagatcatcgagggcaacgagaaagtcgtgcgccca
cgcctgaccgacgccgagttcttcttcaagcaggacaagaagcagaagctcgaagacttc
aacctgcgcctgcagaacgtggtcttccaggaaaaactcggcagcgtctacgacaaggcc
gagcggatctccaagctggccgccttcattgccccgcgcatcggcggcgacgcccagcgc
gccgcccgtgccggcctgctgtccaagtgcgacctggccaccgagatggtcggcgagttc
ccggagatgcaaggtatcgccggctactactacgccctcaatgacggcgagccggaagat
gtcgccctggccctgaacgagcagtacatgccacgtggcgccggcgccgagctgcccagc
accgtgaccggtgccgccgtggccatcgccgacaagctggacaccctggtggggatcttc
ggcatcggcatgctgcccaccggcagcaaggacccctacgccctgcgtcgcgcggcactg
ggcgtgctgcggatcctgatcgagaagaagttcgacctcgacctgaacgacgccgtggcc
ttcgccgtcagcgccttcggcagcaaggtcaaggccgccggcctggccgaccaggtgctg
gagttcatcttcgaccgcctgcgtgcccgttacgaagacgaaggcgtggatgtagccacc
tacctctcggtgcgtgccctgaagccgggttcggccctggacttcgaccagcgcgtgcaa
gccgtgcaggccttccgcaagctgccggaagccgccgccctggctgcggtgaacaagcgc
gtgtcgaacctgctgagcaagatcgaaggcaatgtgccgaccaccatcgaagccaagtac
ttcgacaacgccaacgagttctccctgtactcggcgatccagcaggcggaccaggcggta
cagcctatggccgcagctcgtcagtacagcgagaccctggcccgcctggccgccctgcgc
gaaccagtggacgccttcttcgaagcggtgatggtcaatgccgaggacgccaaggtacgg
gccaaccgctacgcgctgctggcgcggctgcggggcctgttcctgggcgtggccgacatt
tcggtactgagctga
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