Pseudomonas protegens Pf-5: PFL_0166
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Entry
PFL_0166 CDS
T00249
Name
(GenBank) adhesin/hemagglutinin, HecA family
KO
K15125
filamentous hemagglutinin
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pfl00536
]
PFL_0166
Glycosaminoglycan binding proteins [BR:
pfl00536
]
Heparan sulfate / Heparin
Microbial pathogens
PFL_0166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
PT-VENN
Fil_haemagg
CdiA_C
Serglycin
Motif
Other DBs
NCBI-ProteinID:
AAY95578
UniProt:
Q4KKC0
LinkDB
All DBs
Position
195347..204481
Genome browser
AA seq
3044 aa
AA seq
DB search
MDVRQLAFLARQPSATLQARDTFWGLSKRGLAFILANVMFWQPVVAMADGIVVNGSGTTL
GQAGNGVPIVNIATPNGSGLSHNKFSDYNVGQQGVILNNATGRTQETQLGGIILGNPNLG
GRAANVILNEVYGGSPSQLKGYTEVAGQAAHVIVANPYGVTCNGCGFINTPKATLTTGKP
VIENGQLQRYQVDQGSVAIEGAGLNASNIDQFEIITRSAKLNAEIQARHLAVIAGANDVD
AKTLSATARTANPADAPQLAIDSSALGGMYAGAIKLVGTEAGVGVKLDGKLIASGGDIQL
DADGQLRMADATAEKGAVAIKAGSLEAQGAVYAGSELKVRTRGDLSSQKTLAARDSIQLD
SGGQLSNQGIIEAGVNADNSRNANGDISLNARDLDNRGKSIVASRDLTLNTAQTLDNRGG
TLSGQRQVKVSAGALDNSHQGKLLSAERLQLDAEQVRNGQGGLIKSQQSLDATLGHLGNS
GGELSSQGSSTLVLAGMDNLTGVVLAQQTLEITGTAELDNQGGLLSGWQGLTLNGTGLNN
SNKGTVSSLKGGVEVTLSDALNNSQGGALVSQQALDVKAASLDNSHQGVISSAGEQSLKL
RDLLDNSQGGSIDSAATLTLQAMTLGNNGGTLDAAGDLTFTGTDLDNGTGTFTGKTAVTL
NLLGALNNTHGKLASGGPLRIERAGQIDNRGGQMASQGLLSLFAASLDNRNRGTLMANDP
LTLTLDGALQNGGDGLIYSQTGGLHVQAGSLTNGKGTLQSQGALNLSTGDIDNQSGRILA
RNGNLNIGAGHLDNRGGVLSSVQGSMIADLRGALKNGYDPSNNRQGGVTQAQRLTLKALA
GIDNDGGRISAQSGDALLTTGDFDNRNGGLYAKGLVKVSGGHFDNSGNNGQIAGQQINFD
LSGALNNHKGIIESDSSLTIKAASLDNQTGQLRALGDGGDTRLELGGLFDNRDGSLETAN
QNLAFDAGSFNNRGGSVLHSGNGLFGLSMANLEDVGGRLKTAGQLTLEGERWTNSSSIQA
GKLTVNVNHLTQARTGQLLAGNGLIGSGVNWINDGLIGSDAGVNIDLSGHYSSKGRLSSF
GQLDLKAAQVDLADSASIAGGGNTTVSVFGQLNNAGRLSAAAGLTLNASGINNQGTLGAA
QNLTLTTGGLLNDHGLVFSGDDMGLRVDTLTNSYGNVYSLGHLTIDRDGQGALASRIANR
SGTLQSDGSMTLAASTLENMRDVLATNNGGIYTARIGEVACIEGYNAGDCGGKRNHVWEI
VQREKFEVTEASAASSIAAGVNLNINAGDLLNQSSSISAAGNLMATVNNLTHSGVETGET
ETTRVFMSARTKNASAWYNVANAVTNRYWFQSADYTPDDLGGLEGALAGFIGMTEREWVG
LGTTKKLAGGDQSYAAVIQAGGAVSIKAGNGFDSSVVRPGYTYVGSGARTDTQVPGTAFA
TRISLSPQLPPDLTQQQVNPLALPGFSLPAGQNGLFRLSGQSSSAAQAPAQIAGLPDAAN
LTRPHKYLIETNPVLTDLKQFMSSDYLLSSLGYNPDDSAKRLGDGFYEQKLIQQAVQART
GQRFIDGQNSDEQLFKYLMDNAIQSRQQLNLSVGVTLTSEQVAALTHDIVWLESHEVNGE
QVLVPVLYLAQAKNRLAPNGALIAGNDVNLIAGQDLNNVGTLRATNNLSAQAGQNLINSG
LVEAGNRLDLLAGNDLVNKAGGIIAGRDVSLAATWGDVINERTLTSHQSSNGSYAQQRDF
VDNAARVEAANSLVISAGRDINNNGGVLKSGADTSLKAGRDVNLSAVEQVVSNDRGVRYN
DLSVTQNGSSLQAGRDLAISAGRDITAIASQIEAKRDVAMTATENMSLVSAANEQHAYSK
TKKVTSQEDHVQQVGTTLVAGGNVALKAGEDLALTASRVTAGDEAYLYAGGDVNLSAGQN
SDYSYYRKTKTSSSGLSSSQKTRIDSSNSITQQGSSVSGDTVVIRAGQDIGATASDIVST
HSTSLVAGRNVEIDSATETYEQSHSTSKKKSGLLSSGGIGFTLGSTSAQNTSSSTTENAK
ASTIGSVLGNVDIQAGKDLTLKGSDVIAGKDISLVGQNVSILAAENHNKSEQTSKIKTSG
LTLALSGTVGSAVDAAYQTTKQAREEDDSRLSALQGIKAGLTGVQAWQAAQQGVGMNGDN
IGQFVGISISLGSQQSSSKQTQEQLVSQGSSLTSGNNLSIVAAGSGTAGADGDIRVQGSQ
LKAGNNVLLAAERDIQLEAAANRQKLDGKNSSSGGAIGVSLGVGPNGAGLSIFANGNKGV
GKEKGTGTTWTETTLDAGNQASLISGRDAVLKGAQVNADKITAKVGRDLTLQSLQDTDDY
KSKQSNVSGGASFTFGTMTGSASVSVSQSKIDSKYQSVQEQTGLFAGKGGYQVEVGKHTQ
LDGSVIASTAETDKNRLSTGTLGWSDLKNEAEYKSQMQSASVSSGNGGADGFTSNMPSGM
LIAYNHGGSASGTTSSAISNGTLDIRDPGQQKQDIATLSRDVEHANGSISPIFDKEKEQK
RLREVQLIGEIGTQVTDIVRTEGQLKADQEASKELEEKGIYRPGSNASKEEVEKYQTKLI
ATDAYQQIMGKYGTGGDYQRVAQAVTAALQGLAGGDIGSALAGASAPYLAQLIKKSTGDN
PALNTMAHAVLGAAVAQAQGNSAIAGAAGAAGGELAARLITQQLYGTSDTSSLSEEQKQT
VAALSTLAAGLAGGIAKGDSAGAIAGAGAGKNAVENNHLGTGVNIFGHQLGKDQVAEFGN
ELKASCGDSGGLQACLKTYDTWKETSYRQGGLETKEAQAGWEEFVEAVYTEKVLPLCKGN
AACERNVATHMAVTTVTYAGDSVGIGQAIGEATRAVNLANGNWVRVGLQVVEDASLLATL
GSMLGVAAKGTGTSVVPRKGSVSFENGKTFESLSASEQQGLKAIQNLGYDVHVPLEASKK
GISGLPTAEFNVQGFGKVDVYAPNNLNPKTISREIEKKVVQGQANSVVVVVPESFSKVDM
YKSAAAAFGKNKGGEPIPLKQVIFSQGEKTIQLDRQAINSLLGR
NT seq
9135 nt
NT seq
+upstream
nt +downstream
nt
atggacgttcgccaactcgcctttctggcccgccagccttccgccaccctgcaagcgcgg
gatacgttctgggggctgtccaaacgcggtctggcgttcatcctggccaacgtgatgttc
tggcagcccgtggtggcgatggccgacggcatcgtggtcaacggcagcggtacaacactg
gggcaggccggcaatggggtgcccatcgtcaacattgccacgcccaatggcagcggcctg
tcacataacaagttcagcgactacaacgtcggccagcagggggtgatcctcaacaacgcc
accggccgcacccaggaaacccaactgggcgggatcatcctcggcaaccccaacctgggc
ggccgcgcggccaatgtgatcctcaacgaggtctacggcggcagccccagccagctcaag
ggctacaccgaagtggccgggcaagcggcccatgtcatcgttgccaacccctacggcgtg
acctgcaacggctgcggcttcatcaacaccccgaaagccaccctgaccaccggcaagccg
gtgatcgagaacggccagctccagcgttaccaggtggaccagggcagcgtcgccatcgag
ggtgcgggcctcaacgcgagcaatatcgaccagttcgaaatcatcacccgcagcgccaag
ctcaacgccgagatccaggcccggcacctggcggtgatcgccggggccaacgacgtcgac
gccaagaccttgagcgccacggcccgcaccgccaacccggcggatgcaccgcaactggcc
atcgactcatcagccctgggcggtatgtacgccggggcgatcaaactggtgggcaccgag
gccggggtgggggtgaagctcgacggcaagctgatcgccagtggcggtgatatccaactg
gatgccgacggccagttgcgcatggcggacgccactgccgagaagggcgcggtggcgatc
aaggccggcagcctggaggcccagggcgcggtctacgccggtagcgaactcaaggtacgg
acccggggcgacctgagcagccagaaaaccctcgccgcccgcgacagcatccagctggac
agcggtggccaactgagcaaccagggcatcatcgaagccggggtcaatgccgataactct
cgcaacgccaacggcgacatcagcctcaacgcccgggatctcgacaaccgcggcaagagc
attgtcgccagtcgcgacctgaccctgaacacggcccagaccctggacaaccggggcggc
accctgagcgggcagcgccaggtgaaggtcagtgccggggctctggataatagccatcag
ggcaagctgctgagcgccgagcgcctgcaactcgatgccgagcaagtgcgtaacggccag
ggcggcctgatcaagagccagcagtcactcgatgccaccctgggccacctgggcaacagc
ggcggcgagctgtccagccagggcagcagcaccctggtactggccggcatggacaacctc
accggcgtggtactggcgcaacagaccctggagattaccggtactgcggaactggacaac
cagggcgggctgctgtcgggctggcagggcctgaccctcaatggcacgggcttgaacaac
agcaacaaaggcaccgtttccagcctcaaaggcggtgtcgaggtcaccctcagcgacgcc
ttgaacaacagccagggcggcgccttggtcagccagcaggctctggacgtcaaggccgcc
agcctcgacaacagccaccagggggtgatctccagcgccggcgagcaaagcctcaagctg
cgcgacctgctggacaacagccagggcggctccatcgacagcgccgccaccctgaccctg
caggccatgaccctgggcaacaacggcggcacccttgacgccgcgggtgacctgaccttt
accggcaccgacctggacaatggcaccggcactttcaccggcaaaaccgccgtcaccctt
aatctgttgggcgcgttgaacaatacccacggcaagctggccagcggcggcccgctgcgc
atcgaacgcgctgggcagatcgacaatcggggtggccagatggccagccagggcctgctg
agcctgttcgctgccagcctggacaatcgtaaccgtgggaccttgatggccaacgaccca
ctgaccctgaccctggacggcgcactgcagaacggcggtgatggcttgatctacagccag
accggcggcctgcacgttcaggccgggagcctcaccaatggcaagggcaccctgcagagc
caaggcgctctgaacctgagcaccggcgacatcgacaaccagagtggtcgcatcctggcc
aggaacggtaacctgaacatcggcgccggccacttggataaccgtgggggcgtgctttct
agcgtgcaaggctcgatgatcgccgatcttcgcggcgcgctgaaaaacggctacgacccg
agcaacaaccgccagggcggcgtgacccaggcccagcgcctgaccctcaaggccctggct
ggcatagacaacgacggcgggcggatttccgcgcaaagcggcgatgcgctgctcaccacc
ggcgatttcgataaccgcaacggtggcctctacgccaagggccttgtcaaagttagcggc
ggccatttcgacaacagtggcaacaacgggcaaatcgccggccagcagattaatttcgac
ctcagcggcgctctgaataaccacaagggcatcatcgaaagcgacagcagcctgacgatc
aaggccgccagcctcgacaatcagaccggccaattgcgcgccctgggagacggtggcgat
acacggctggagctcggcggattgttcgacaaccgcgatggctctctggaaaccgccaac
caaaatctggccttcgatgctggcagcttcaacaaccgtggcggcagcgtgctgcacagc
ggcaacggcctgttcggcctgtccatggccaacctcgaggatgtgggcgggcgcctgaaa
accgccggccagctgaccctggaaggcgaacgctggaccaacagcagctcgatccaggcc
gggaaactgacagtcaacgtcaaccacctgacccaggcccgtacgggccagctcctagcc
ggcaatggcctgataggcagcggcgtgaactggatcaatgacggcctgatcggcagtgat
gcaggcgtcaatatcgacctcagtggtcattacagcagcaagggccgactcagcagcttt
gggcagctggacctaaaagctgcccaagtggacctggcagacagtgccagtattgctggc
ggcggcaacaccacagtctcggtgttcggccagttgaacaacgcagggcgcctgagcgct
gcggccgggctcacgctcaacgcgagtggcatcaacaatcagggcacccttggggctgcc
cagaacctgaccttgaccaccggcggcctgctcaacgatcacgggctggtgttcagtggc
gacgacatggggctgcgggtcgacaccctgaccaacagctacggcaacgtttacagcctc
ggtcatctgacgatcgatcgcgatggtcagggggctctggccagccgcatcgccaaccgt
tccggcaccctgcaaagcgatggttccatgacgcttgcagccagcacccttgagaacatg
cgcgatgtgctggccaccaacaacggcggcatctacaccgccagaattggtgaagtcgcc
tgcatcgagggctacaacgccggtgactgtggcggcaaacgcaatcacgtgtgggagatc
gttcagcgcgaaaaattcgaagtcaccgaagcgagtgcggcgtcgagcattgccgctggc
gtcaacctgaatatcaacgccggcgacctgctgaaccagagcagcagtatcagcgcggcc
ggcaacctgatggccacggtcaacaacttgacccacagcggcgtggaaaccggcgagacc
gaaaccacccgggtgttcatgtcggcgcggaccaaaaatgccagtgcctggtacaacgtc
gctaacgctgtcaccaaccgatactggttccagagtgcggattatacgcctgatgacctg
ggtggtctggaaggcgcgctggccggttttatcggcatgaccgaacgtgagtgggtcggc
ctggggacgacgaaaaaactcgccggtggtgatcaaagctatgccgcagtgatccaggcc
gggggagcggtgagcatcaaggccggcaatggcttcgacagcagcgtggtccgtccgggt
tacacctatgtcggcagcggtgcgcgtaccgatacccaagtaccgggtaccgccttcgcc
actcgcatcagcctcagcccgcaactgcccccagacctgacccagcaacaggtcaacccc
ctggccctgcctggctttagtctgcccgctgggcagaacggtctgttccgcctcagtggt
cagagcagcagcgccgcacaagctccggcgcagatcgccggcctgccggatgccgcgaac
cttacccggccgcacaagtacctgatagaaaccaacccggtactcaccgacctcaagcag
ttcatgagctcggactacctgctgtccagcctcggttacaacccggacgacagcgccaaa
cgcctgggggatggcttctacgagcagaagctgattcaacaagcggtacaagcccgtacc
ggccagcgttttatcgacggccagaacagcgacgaacagctgttcaagtacctgatggac
aacgccattcaaagccggcaacagctcaacctgtcggtgggcgtgaccctgacctccgag
caggtggcggccctgacccacgacatcgtctggctggaaagccatgaagtgaacggtgaa
caagtgctggtgcccgtgctgtacctggcccaggccaagaaccgactggccccgaacggc
gccctgatcgcgggtaacgacgtcaacctgatcgccggccaggacctgaacaacgttggc
accctgcgcgcgaccaacaacctgtcggcccaggccgggcagaacctgatcaacagcggc
ctggtggaagccggtaatcgccttgacctgctggccggcaacgacctggtgaacaaggcc
ggcggcatcatcgccgggcgtgacgtgagcctcgccgcaacctggggcgacgtcatcaac
gagcgcaccctgacctcgcaccagagcagcaacggcagctacgcccagcagcgcgacttc
gtcgacaacgccgcccgggtagaagcggcgaacagcctggtgatcagtgccgggcgcgac
atcaacaacaacggcggcgtactcaagagcggagccgacaccagcctcaaggccggtcgc
gacgtcaacctgagcgctgtggaacaggtggtcagcaacgaccgcggcgtgcgctacaac
gacctcagcgtgacccagaacggctccagcctgcaggccggtcgcgatctggccatcagc
gccggccgcgacatcaccgccatcgccagccagatcgaagccaagcgcgatgtggcgatg
accgccacggaaaacatgagcctggtttcagcggccaatgagcagcatgcgtatagcaag
accaagaaggtcaccagccaggaggatcatgttcagcaggtgggcaccaccttggttgcc
ggcggcaatgtggcgctcaaggccggtgaggatcttgcgctgacggccagtcgggtgacg
gcgggggatgaggcgtatctctatgcgggcggtgatgtgaacctcagcgctgggcagaac
agcgactacagctattaccgcaagaccaagaccagcagttccgggttgtccagcagccaa
aaaacacggattgatagcagcaactccatcactcaacagggctcttccgtcagtggtgat
acggtggtcatccgcgccggccaggatattggcgcgaccgccagcgatattgtctccacc
cactccaccagcctggttgcgggacgcaatgtcgagatcgatagcgccaccgaaacctac
gagcaaagccattcgacatcgaagaaaaagtccggcttgttgagcagtggcgggattggt
ttcaccctgggttcaactagcgctcagaacacctcgtccagcaccaccgaaaacgccaag
gccagcaccattggcagtgtgctgggcaacgtcgatatccaggccggcaaggatctgact
cttaaaggttccgacgtcatcgccggcaaggacatcagtctcgtcgggcagaacgtcagc
atcctcgcggcggaaaatcacaacaagagcgagcaaacctccaagatcaagaccagcggc
ctgaccctggcgctttccggaaccgtcggcagtgctgtcgacgccgcgtaccagaccacc
aagcaagccagggaggaggacgatagccgcctttctgccctgcaaggcatcaaggctggc
ctgactggtgtccaggcctggcaagcggcccaacagggcgtcgggatgaacggcgataac
attggccagttcgtcggtatcagtatttccctgggctcgcagcagtccagttccaagcag
acccaggaacagttggtcagtcagggcagtagcctgaccagtggcaacaacctctccatt
gtggctgccggtagcggtaccgcaggggcggatggcgatatccgcgtgcaaggcagccaa
ctcaaggcgggcaataacgtgctgctggccgctgagcgtgacatccagcttgaggccgcg
gccaaccggcaaaagcttgatggcaagaacagcagcagcggcggtgccattggcgtcagc
ttgggcgttggccccaacggcgcaggcctgagtatcttcgccaacggcaacaagggtgtg
ggcaaggaaaagggcaccggcaccacctggaccgagaccaccctggacgccggtaaccag
gcgagcctgatcagtgggcgggacgccgttctcaagggtgcgcaagtcaatgcggacaag
atcacggccaaggtcgggcgcgacctcacgctgcaaagcctgcaagacaccgacgactac
aagtccaagcagagcaatgtcagcggcggtgccagcttcacgttcggcacgatgaccggc
agcgcttcggtcagcgtcagccagagcaagatcgactccaagtaccagagcgtgcaggaa
cagaccgggttgttcgccggcaagggcggctatcaggttgaagtgggcaagcacacccag
ctcgatggcagcgtcatcgccagcaccgcagaaaccgacaaaaaccgcctgagcacgggc
accctgggctggagcgatctcaagaacgaggccgaatacaaaagccagatgcagagcgcc
agcgtcagcagcggtaacggcggtgctgatggcttcaccagcaacatgcccagcggcatg
ttgatcgcctacaaccacggcggcagtgccagcggcaccacctcatcggcaatctccaac
ggcactttggacattcgtgatccaggccagcagaagcaggacattgccaccctcagccgc
gacgtcgaacacgccaatggcagcatcagcccgatcttcgacaaggagaaggagcagaag
cgcctgcgagaggtgcagctgattggcgagattggcactcaggtgacggacattgttcgg
accgaggggcagttgaaggccgatcaagaggcgagcaaggaacttgaagagaaaggtatt
tatcgaccaggaagcaatgccagcaaagaggaggttgagaagtaccagacgaagctgatt
gctactgatgcctatcagcagatcatgggcaaatacggtacgggtggtgattaccagcga
gtagcccaagccgtcaccgccgccctgcaaggattggccggtggggatatcggctctgcc
ctggctggcgcctcggcaccgtatctggcgcagttgatcaagaaatccacaggtgacaat
ccagccctcaacacaatggctcacgctgtgctgggagctgccgttgcccaggcccaaggt
aactcggcaatagcgggcgctgcaggtgctgcaggtggagagctggctgctcgattgatc
acccagcagctgtatggcaccagcgataccagctccctcagtgaagaacaaaagcagaca
gtggctgcgctatcgacgttagccgctgggcttgcggggggaattgcgaaaggcgatagc
gcgggcgcaattgcgggtgccggggctggcaagaatgctgtggaaaataatcatttagga
acaggggtcaatatttttggccatcaattgggtaaggaccaagtagcggaatttggtaac
gaactcaaagcatcctgtggtgattccggagggctgcaagcttgtctgaaaacttacgac
acatggaaagaaacttcctaccggcagggcgggttggagacaaaagaggctcaggcaggg
tgggaagagttcgtagaggcagtttacacagagaaagtgctgcctctatgtaaagggaac
gctgcttgtgagcgcaatgttgctacccatatggccgtcacgacggtgacgtatgcgggc
gacagcgtaggtataggtcaggcaatcggcgaggctacccgggcagtcaatttggctaac
ggaaactgggttcgcgttgggttgcaagttgtagaggatgcgagtttactggctacgctt
ggtagtatgctcggagtagctgcaaaaggaactgggacttctgtagttccccgaaaagga
agtgtttccttcgagaacggaaagacatttgagagtctgagtgcttcggagcaacaagga
ctgaaagctattcaaaatcttggctatgacgtccatgtacccttggaggcaagcaaaaaa
ggcatatctggcttgcctactgctgaattcaacgttcaagggtttggtaaggttgacgtt
tacgcgccaaataatttgaaccctaagactatttctcgagagattgagaagaaagttgtt
caagggcaggcaaattcagtggtggtggtcgttcctgagagttttagcaaagtagatatg
tataagtctgctgctgcagcttttgggaaaaacaaagggggggaaccaattcctctgaag
caagtgattttctctcagggggaaaaaactattcagttagataggcaagctattaatagc
ctgttagggaggtaa
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integrated database retrieval system
