Pseudomonas protegens Pf-5: PFL_0254
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Entry
PFL_0254 CDS
T00249
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfl03000
]
PFL_0254
Transcription factors [BR:
pfl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PFL_0254
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_31
HTH_3
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AAY95665
UniProt:
Q4KK33
LinkDB
All DBs
Position
complement(294956..296002)
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AA seq
348 aa
AA seq
DB search
MSSDQAPGRKRRGAGRVTLNTVARQAGVSAITVSRYFNQPDSVSPERRERIAAVVAELGY
VPNLVAGGLASARGRIVAMVIPNISGPIFAQTIQGFSDTLSRHGYQLLLASSYFDARQEE
SAVRAFLGWSPAALVLTSHFHSPGTEKMLADTEIPVIETWDYQPQRQPLQIGFSHFQVGV
TAARHLHAKGYRRIAFVQNSAPGDFSALERRDGYLATLAELGLAPRVFAPDADRAPFEAG
KQAMEALMGSPERPDAIIFANDNLAAGGLLAGQRAGLKIPEECAVLGFGDYPFAQMLLPS
LSTIQPPALQIGVLAATRVLESLGVLPVAGTVQRLNLLQCRLIERESS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgaccaagcgcctggccgcaagcgccgcggcgccggccgcgtaaccctgaac
accgtggcgcgccaggccggggtgtcggcgatcaccgtttcgcgctatttcaaccagccc
gacagtgtttcccccgagcgccgtgaacgcatcgccgcggtggtcgccgaactcggctat
gtaccgaacctggtggccggcgggctggcctcggcccgcgggcggattgtcgccatggtc
atcccgaacatttccgggccgattttcgcccagaccatccagggcttcagcgacaccctc
agccgccatggctaccaactgctgctggcttccagctacttcgacgcaaggcaggaggag
agcgcggtaagggcctttctcggctggtcgccggcagccctggtactgaccagccacttc
catagcccgggcacggaaaagatgctcgccgacaccgagatcccggtgatcgaaacctgg
gactaccagccccagcgccaaccgctgcagatcggcttttcgcactttcaggtaggggtc
acggccgctcgccacctgcacgccaaaggctaccggcgcatcgccttcgtgcagaacagc
gcccccggagacttcagtgccctggagcggcgcgacggctatctggcaacgctggccgag
ttggggctggcgccccgggtgtttgccccggatgccgaccgcgcgcccttcgaggccggc
aaacaggccatggaagcgctgatgggcagcccggaacgccccgacgcgatcatcttcgcc
aacgacaacctggcggccggcggcctgctggcggggcaacgagccgggctgaagatcccc
gaggaatgtgcggtgctgggctttggcgactatccctttgcgcagatgctgctgcccagc
ctgagcaccatccagccaccggcgcttcagatcggcgtactggccgcgacccgggtgctg
gagagcctgggagtgctgccagtggcaggcacggtgcaacgcctgaacctgctgcaatgc
cggctgatcgagcgcgaaagcagttga
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