Pseudomonas protegens Pf-5: PFL_0275
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Entry
PFL_0275 CDS
T00249
Name
(GenBank) S1 RNA binding domain protein
KO
K06959
protein Tex
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PFL_0275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AAY95686
UniProt:
Q4KK12
LinkDB
All DBs
Position
complement(320355..322679)
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AA seq
774 aa
AA seq
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MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRY
LRELDERRISILASIEEQGKLTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPNLAPETEAARFVDAEKGVADVKAALEGAKYILMERFAEDASLLEKLRN
FLKQEATISARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQQFGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN
KWDQTLGILAALCAKHSVDLIAIGNGTASRETDKLAAELIKKYPAMKMTKVMVSEAGASV
YSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVSHRDEHGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAADTGRDIRSLIGDSGFLKRLDP
KKFTDETFGLPTVTDILQELDKPGRDPRPEFKTAEFQDGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMG
DTPGEKIDGARGSRPGSAPRSSQGNAPRKESAAPAPSNNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcattgccgaggaactcggcgtacgcccacaacaggtcgaa
gcggccgtcgctctattggatgaaggctccaccgtgcccttcatcgcccgctaccggaaa
gaagtcaccggcagcctcgatgacacccagctgcgtcatctggaagagcgcctgcgctac
ctgcgagaactcgacgaacggcggatcagcatcctggccagcatcgaagagcaaggcaag
ctgaccccggagctggcacgcgacatcaagctggccgacaccaagacccgcctcgaagac
ctttacctgccttataagcagaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgaactggccgacggcctgttcaacgacccgaacctggctccggaaaccgaagcc
gcacgcttcgtcgacgccgaaaaaggcgtggccgacgtgaaggccgccctggaaggcgcc
aagtacatcctgatggagcgcttcgccgaagacgccagcctgctggaaaagctgcgcaat
ttcctcaagcaggaagcgaccatcagcgcccgcgtgatcgccggcaaggaagaggaaggc
gccaagttccgcgactacttcgaacacgatgaaccactcaaaagcatgccgtcgcaccgc
gccctggcaattttccgtggccgcaacgaaggcattctcagctccgcgctgaaagtcggt
gacgaactgccgggcaccatgcacccgtgcgaaggcatgatcggccagcaattcggcatc
cagaaccagaaccgcccggccgacaaatggctcggcgaagtggtgcgctggacctggaag
gtcaagctctacacccacctggaaaccgacctgctgggcgaactgcgcgatggcgcggaa
accgaggcgatcaacgtcttcgcccacaacctgcacgacctgctgctggccgctccggcc
ggcccgcgcgccaccctgggcctggacccgggcctgcgcaccggctgcaaggtggcggtg
gtggatgccaccggcaagctgctggaccacgccaccgtctacccccatgtgccgcataac
aaatgggaccagactctgggcattctggctgccctgtgcgccaagcactcggtggacctg
atcgccatcggcaacggcaccgccagccgggaaaccgacaagctggcggccgagctgatc
aagaaatacccggccatgaagatgaccaaggtcatggtctccgaagccggtgcatcggtg
tactcggcctcggagctggcggccaaggaattcccggacctggacgtatcgatccgtggc
gcggtgtccatcgcccgccgcctgcaggatccactggccgagctggtgaagatcgacccg
aaatccatcggtgtcggccagtaccagcacgatgtctcgcaactgaaactggcccgtggc
ctggacgcggtggtggaagactgcgtgaacgccgtgggcgtcgacgtcaacaccgcctcc
gtggccctgctggcgcggatctccggcctcaacgcgaccctggcgcagaacatcgtcagc
caccgcgacgaacacggtgccttcaagacccgcgccgcgctgaaaaaagtcgcccgcctg
ggtgaaaagaccttcgaacaggccgccggcttcctgcgtgtgatgaacggcgacaacccg
ctggacgcttccgcagtgcacccggaagcctacccgctggtacaacgcatcgctgccgac
accggccgcgacatccgctcgctgatcggcgacagcggcttcctcaagcgcctggacccg
aaaaagttcaccgacgaaaccttcggcctgcccaccgtcaccgacatcctccaggaactg
gacaagcccggccgcgacccgcgccccgagttcaagaccgccgagttccaggacggtgtc
gaagacctcaaggacctgcaactggggatgatcctcgaaggcgtggtgaccaacgtcacc
aatttcggggccttcgtcgacatcggcgtgcaccaggacggcctggtgcacatttcggcg
ctgtcggagaagttcatcaaggacccacgcgaagcggtgaaggccggtgacgtggtgaaa
gtgaaggtcatggaagtcgatatcccgcgcaaacgcgtcggcctgtcgatgcgcatgggc
gacaccccgggcgagaagatcgacggtgcccgtggctcccgccccggctcggcgccacgc
tcctcccagggcaatgcaccgcgcaaggagagcgccgcgcccgccccgagcaacaacgcc
atggcctcgctgttcgccaacgccaagcagttgaagaaacgctga
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