Pseudomonas protegens Pf-5: PFL_0440
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Entry
PFL_0440 CDS
T00249
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PFL_0440 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfl03400
]
PFL_0440 (priA)
Enzymes [BR:
pfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PFL_0440 (priA)
DNA repair and recombination proteins [BR:
pfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFL_0440 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
HypA
WHD_PriA
AAA_16
PIF1
iSirtuin
TrwB_AAD_bind
nSTAND3
AAA_22
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AAY95849
UniProt:
Q4KJJ9
LinkDB
All DBs
Position
complement(503900..506119)
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVLRAQLHPGMRLRVPFGRREMIGILVEVADHSEVP
AEKLKPALALLDPTPPLPPALFKLCLWTAQYYQHSLGDTLSWALPVLLRQGELAEARQER
FWSIAPGARLDDPRIARAPRQREALATLAQHPHGVPHTLLSKLMLSKDSLDLLLAKDLVQ
VEVRKHAPGVRHEHWLAQPELPLNSEQRAAYEAIRAGFDSYHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECQRCDARMTVHQRSGELRCHHCGHVERVPRHC
PQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSEAERLLAEQNLGGIELLGPVPAPMERRAGRYRAQLLLQANARAPLHRLLSSWLLVLEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccatcctgcgcctcgccctgccctcgcccctgcgccgcctgttcgactac
cgtgctccggccggggtgctgcgtgcccagttgcaccccggcatgcgcctgcgggtgcca
ttcggccgccgggaaatgatcggcatcctggtggaggtggcggatcacagcgaggtcccg
gcggaaaaactcaagccggccctggccctgctggatcccacgcctccgctaccgccggcc
ctgttcaagctgtgcctgtggaccgcccagtactaccagcacagcctgggagacaccctg
agctgggcattgccagtgctgttgcgccagggcgagctggccgaggcccgccaggaacgc
ttctggtcgatcgcccccggggcccggctcgacgacccgcgcatcgctcgcgccccacgc
cagcgcgaagccctggcaaccctggcccagcacccacacggcgtgccccataccctgctg
agcaagctgatgctgagcaaggacagcctcgacctgctgctggccaaggacctggtgcag
gtggaggtgcgcaagcacgcgccgggcgtgcgccacgaacactggctggcccagcccgaa
ctgccgctcaacagcgagcagcgcgccgcctatgaagccatccgcgccgggttcgacagc
tatcacgcgtttctcctggccggggtcaccggcagcggcaagaccgaggtctacctgcaa
ctgatccgcgaaaccctggaagccggcaagcaggccctggtgctgattccggagatcaac
ctcggcccgcagaccctggcgcgcttcgagcaacgcttcaacgcccgcatcgccctgctg
cactcggcggtcaatgaccgcgaacgcctggacgcctggctggctgcccgggacggcgag
gccgacatcatcatcggcacccgctcggccctgttcacgccgatgaagaaccctggcctg
atcatcatcgacgaggagcacgacgggtcctataaacagcaggaaggcctgcgttaccac
gcccgcgacctggctctggtacgtgcgcgccaagaaaacattcccatcgtcctgggctcg
gccacgccgtccctggaaagcctgcacaacgcctacaccggccgctacggcctgctgcgc
ctgaacgagcgggccggcggcgccaagcagccgcgtttcctgcgcctggacgtgaagagc
cgcccgctggacagcggcatttccggccccatgcagcaagccatcggccagaccctggcc
gccggccagcaggtcctggtgttcctcaaccgccgcggcttcgccccgaccctgctctgc
cacgactgcggctggatgtccgaatgccagcgctgcgacgcccgcatgaccgtgcaccag
cgttccggcgagctgcgctgccaccactgcggccatgtggagcgggttccgcgccattgc
ccgcaatgcggcaaggtcgacctgcgccccgtgggcgccggcaccgagcgggcggaagag
cgcctgggcatcttgtttcccgactacccggtgctgcgggtggaccgcgacagcacctcg
cgcaaggatgcaatgaaccagctgttcgccactatccagaaaggccagccgtgcatcctc
gtgggcacccagatgctggccaagggtcatcactttccccgggtgaccctggtgtcgatc
ctcgatgccgatggcggcctgttctccggcgacttccgcgccagcgagcgcatggcgcaa
ctgatcgtccaggtcgccgggcgggccggccgggccgaagagccgggcaaggtgatcatc
cagacccacctcgccgaccacccgttgctggtgcagttgaccgagcagggctacttcgcc
ttcgccgaacaggccctgagcgagcgccgcgccgccggcctgccacctttcgcccacctg
gcgctgctgcgggccgaagcccacaaaccgggccaggccgaggggttcctcgatgaagcc
tgcagcgaggccgagcgcctgctggcggaacagaacctggggggcatcgaactattgggc
ccggtgccggctccgatggagcggcgcgccggacgttatcgcgcgcaattgctgctgcag
gccaatgcccgagcgcccttgcatcgtttgctcagcagttggctgctggtgctggaacag
atgcccagcgggcggcaggtccgctggtcgctggatgtggatcccgtggatctgtattga
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integrated database retrieval system
