Pseudomonas protegens Pf-5: PFL_0527
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Entry
PFL_0527 CDS
T00249
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PFL_0527 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfl02000
]
PFL_0527 (msbA)
Enzymes [BR:
pfl01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PFL_0527 (msbA)
Transporters [BR:
pfl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PFL_0527 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC_ATPase
DEAD
RsgA_GTPase
AAA_29
nSTAND3
MMR_HSR1
NB-ARC
AAA_30
nSTAND1
APS_kinase
Zeta_toxin
AAA_24
NACHT
Motif
Other DBs
NCBI-ProteinID:
AAY95936
UniProt:
Q4KJB2
LinkDB
All DBs
Position
615302..617107
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AA seq
601 aa
AA seq
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MTDSSPDASPSSLKIYFRLLGYVRPYIGLFLISIVGFLIFASTQPMLGYILKYFVDGLSN
PQAVLFPGVPYLRDMQLLQAVPLLIVLIAAWQGLGSYLGNYFLAKVSLGLVHDLRVQLFN
NLLTLPNRYFDKHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFGSLLWMNWR
LTLVMIAILPLIAVMVRTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGETYE
QQRFLAASQGNTDKQLRMTRTGAIYTPLLQLVIYSAMAVLMFLVLYLRGDASAGEMVAYI
TMAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEPEVDRGTVERASINGHLEVRNLS
FTYPGTERQVLDDISFSIEPGKMVALVGRSGSGKSTLANLIPRFYHHDKGQILLDGTEVE
DFRLLNLRRHIAQVTQHVTLFSDTVANNIAYGDLAGAPREDIEKAAADAYAMDFIAQLPE
GLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMK
GRTTLVIAHRLSTIEKADLILVMDQGRIVERGSHAQLLAQNGYYSRLHAMGLEEPAPSGI
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactccagtcctgacgcaagcccctcgagcttgaaaatctacttccgtctgctc
ggctatgtgcggccctatattggtctgtttctcatcagcatcgtcgggttcctgatcttc
gcttcgactcagcccatgctcggctacatcctcaagtatttcgtcgacggcctgtccaac
cctcaggcggtgctgtttcccggtgtgccttatctgcgcgacatgcagttgctccaagcg
gtgccgctgctgatcgtgctgatcgctgcctggcaaggcctgggctcctacctgggcaac
tacttcctggctaaggtatccctggggctggtgcacgatttgcgggtgcaactgttcaac
aacctgttgaccctgcccaaccgttacttcgacaagcacaactccgggcacctgatctcg
cgtatcaccttcaacgtgaccatggtcacgggggcggcgacggacgcgatcaaggtggtg
atccgcgaaggcatgaccgtgatcttcctgttcggctcgctgttgtggatgaactggcgc
ctgaccctggtgatgatcgccatcctgccgctgatcgcggtcatggtccgcaccgccagc
aagaaattccgcaagcagagcaagaagatccaggtggccatgggtgatgtgacccatgtt
gcctcggaaaccatccagggctatcgcgtggttcgcagctttggcggcgagacctatgag
cagcagcgttttcttgcggccagccagggcaacactgacaagcaactgcgcatgacccgt
accggcgccatctacaccccactgttgcaactggtgatctacagcgccatggcggtgctg
atgttcctggtgctgtatctgcgcggtgatgcttctgccggtgaaatggtggcctatatc
accatggccggtctgctgcccaagccgatccgccagctgtccgaagtcagctcaacgatc
cagaaaggcgtggcgggtgcggagagcatcttcgagcagttggacgtcgagcctgaggtc
gatcgcggcaccgtcgagcgcgccagcatcaatgggcacctggaggtgcgcaacctgagt
ttcacctacccgggaaccgaacggcaggtgctcgatgacatcagcttcagtatcgagccc
gggaaaatggtggcgctggtggggcgttccggcagtggcaagtcgactctggccaacctg
attccgcggttctaccaccacgacaagggccagattcttctggatggcaccgaggtcgaa
gacttccgcctgctgaacctgcgtcggcatattgctcaggttacccagcacgtcaccctg
ttcagtgacaccgtggccaacaacattgcctacggtgacctggccggtgcgccgcgtgag
gacatcgagaaggccgccgccgatgcctatgccatggacttcattgcccagttgcccgaa
ggcctggatacccaggtaggggagaacggcgtactgctttcaggtggccagcgccagcgc
ctggcgattgcccgggccttgctgaagaacgccccgctgctgattctcgacgaggccact
tcggccctggataccgaatccgagcggcacatccaggccgccctggacaaggtcatgaag
ggccgcaccaccctggtgattgcccaccgcctgtcgaccatcgagaaagccgacctgatc
ctggtcatggaccaggggcggattgtcgagcgcggcagccatgcccagttgctggcacag
aacggctactactcgcggttgcatgccatgggcctggaagagcccgcgcccagcggaatc
gcctga
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