Pseudomonas protegens Pf-5: PFL_0538
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Entry
PFL_0538 CDS
T00249
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00730
Thiamine metabolism
pfl01100
Metabolic pathways
pfl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PFL_0538 (thiC)
Enzymes [BR:
pfl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PFL_0538 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AAY95947
UniProt:
Q4KJA1
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All DBs
Position
627925..629814
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AA seq
629 aa
AA seq
DB search
MTTKLKNASNLSESAQVDQQSVQPFTRSQKVYVQGSRPDIRVPMREITLDVTPTDFGGEI
NAPVTVYDTSGPYTDPNVVIDVRKGLGDVRSAWIEDRGDTERLAGLSSNFGQQRLADPEL
TKLRFAHVNNPRRAKAGANVSQMHYARKGIITAEMEYVAIRENMKLQEARAAGLLKQQHA
GHSFGASIPKEITPEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALG
SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGV
AEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAH
HKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDEAQFGELETLGELTKIAWKH
DVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRI
EAVDVDVAKGLAEQAERFKQEGSQLYKKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaaattaaaaaacgctagcaacctcagtgagtcggcccaagtcgaccaacaa
tcggttcagccctttacccgctcgcaaaaagtctatgtccagggttcgcgcccggacatc
cgcgtgcccatgcgcgaaatcaccctggacgtgacccccaccgacttcggcggcgagatc
aacgccccggtgaccgtgtacgacacctccggcccttacaccgatccgaacgtggtgatc
gatgtgcgcaagggcctgggcgatgtgcgttcggcgtggatcgaggaccgtggcgacacc
gagcgtctggcgggcctgagctccaacttcggccagcagcgcctggccgacccggagctg
accaagctgcgcttcgcccacgtcaacaacccgcgccgggccaaggccggggccaacgtc
agccagatgcactacgcgcgcaaaggcatcatcaccgccgagatggaatacgtcgccatc
cgcgaaaacatgaagctgcaagaggcccgtgccgccggcctgctgaagcagcaacacgcc
ggccacagcttcggcgccagcattccgaaagaaatcaccccagagttcgtccgcgaggaa
atcgcccgtggccgcgccatcatcccggccaacatcaaccacgtcgaactggaaccgatg
atcatcggccgcaacttcctggtgaagatcaacggcaacatcggcaacagtgccctgggt
tcctcgatcgaggaagaagtggcgaaactgacctggggcatccgctgggggtcggacacg
gtgatggacctgtccaccggcaagcacatccatgaaacccgcgagtggatcatccgcaac
tcgccggtgccgatcggtaccgtaccgatctaccaggccctggaaaaggtcaacggcgtg
gccgaggacctgacctgggagctgttccgcgacaccctgatcgagcaggccgagcagggc
gtggactacttcaccatccacgcaggcgtcttgctgcgttacgtgccgctgaccgccaag
cgggtcaccggcatcgtgtcccggggtggctcgatcatggccaagtggtgcctggcgcac
cacaaggagaacttcctctacacccacttcgacgaaatctgcgaaatcatgaaggcctac
gacgtcagcttctccctgggagatggcctgcgcccggggtcgattgccgacgccaacgac
gaagcccagttcggtgaactggagaccctcggcgagctgaccaagatcgcctggaagcat
gacgtgcagtgcatgatcgaaggcccgggccacgtgccgatgcagttgatcaaggagaac
atggacaagcagctggagtgctgcgacgaggcgccgttctacaccctgggcccgctgact
accgacattgcccccggctacgaccacatcacctccggtatcggtgcggcgatgatcggc
tggttcggctgcgccatgctctgctacgtcacgcccaaggaacacctgggcctgccgaac
aaggatgacgtgaagaccgggatcatcacctacaagatcgccgcgcatgctgcggatctg
gcgaaaggtcatccgggcgcgcagatccgcgacaacgccttgtccaaggcgcgtttcgag
ttccgctgggaagaccagttcaacctcggcctggacccggacacggcccgctcgtaccac
gacgagaccctgcccaaggattcggccaaggtcgcgcatttctgctccatgtgcgggccg
aagttctgctcgatgaagatcacccaggaagtgcgtgagtacgcagccaaccagcgtatc
gaagcggtggatgtggatgtcgccaagggcctggcggaacaggccgagcgcttcaagcag
gaaggcagccagctgtacaagaaagtctga
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