Pseudomonas protegens Pf-5: PFL_0622
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Entry
PFL_0622 CDS
T00249
Name
(GenBank) adhesin/hemagglutinin, HecA family
KO
K15125
filamentous hemagglutinin
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pfl00536
]
PFL_0622
Glycosaminoglycan binding proteins [BR:
pfl00536
]
Heparan sulfate / Heparin
Microbial pathogens
PFL_0622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
AAY96029
UniProt:
Q4KJ19
LinkDB
All DBs
Position
721622..731257
Genome browser
AA seq
3211 aa
AA seq
DB search
MDVRKPFAQCIALSLSGILFLNPIVSVAAGLALDPAAGGNATIGAAGNGVPIVNINAANG
AGLSHNKFSEYNVGSNGLILNNGTGSTQNTQLGGYIMGNPNLKGQAAQVILNEVTGSNRS
KLAGYTEVAGQSARVIVANPHGITCNGCGFINTPRATLTTGKPVIEGQKLDRFQVDGGDI
SIEGAGLNASNIDQFDLITRSTKLNADLYAKKLNVITGRNDVKADDLSVTARDADASAKP
ELAIDSSALGGMYAGAIRLVGTEKGVGVNMSGEMAASTGDIQIDANGKVTVAGMGANQAI
AIKAQSIELKGKAYAGTEATLQAAEQIQVQTSLAARDRVQVVDAAQVVNHGIIEAGVNTD
NSRNDHGEVKLTAGTLENRGNVLASRNLELTARQALNNQNGVIQGPKVEVKTARLVNQGA
QARVLAQHELVLTTPAIANLGGLIRFGEQQAATLTLDSLNNNGGRLEVAGADLTLKAREV
SNQKGSMIADRVEISAGRLDNQQGLIGASQGSATFKVSEQLNNNGGQLQAQTLLETQGAE
LLNQGGKLLADQIKITGTRLDNSQKGLVSAEKGELQVSLAQDLINAGGKLQATSLLSLKS
ASVDNRAGTLVAPQLTLTSSGKLDNQGGTVDATGLELHTADIDNQGGLLQGKDNLLLEAR
DLANNQGQVIGNVLTANLDSLSQNQGGVLSAEAGQLTLTVKQHLNNALGHLQAKNGDVQI
GSGSLNNQGGVVVGNQLLLTNNGLLDNRGGQLVGDRLSLSTQRLDNQGAGLLAAGSDGLL
LTLTADGATPGQLLNSQGRLQSDGHLQVNGGQLNNSGGVILGESVGINAAGLDNSARGAV
VAKTGGLHVALNNGVLNNSAGVIDAGDQALKVTQLARLDNQGGTLKGKRLEVDGGALDNR
QGQLLAGSDGLNLVAGGLNNAEGMILAQGGHGEVTLGQGSLDNRGGTLQGATLAVTAGAV
DNSALNGKAGLISSQAGNLKLVVDRLTNQAGKLYANGLLSTSGQTLDNRWGGEISAQQLD
LTTAANLYNQGGLVESAGSLLLVGGNLDNSAGGRIRAVGGEQSRISLGGSLYNQGGSLAL
GSNAFSLNAGNLNNVGGSIEHAGNGLFKLDLGGLSGLQGRITGLGRGDWDIGWVDRSGLM
QLNGALDLSTGGDLNLSAGDRIASASGLRVGAATLNNAGELASDGYLTLDLGGNLNNSGL
LSSRGKLTVGASDLNQNGGRIASGGDTELNLRGTLDNLGRLIASQNLYVSAGQINNRGTL
GALGQMQLRSSNGITTSADTLIYSGGDMLLRGNGLANSYGDIYSAGNLSFAALDGGRAAL
LSNRSGTIESEGDMNLNVALLQNAMDQYQVGETITQRNIVINCTDCSGDYHTATYIVNTT
YEGTMGEHSAGARLVSNRDLTINADTVENDQSLIAANRDVSITANNLYNRGLTLNKRVES
ISYFLHGVSKGAFRAAERATIAWNAANANRAPGQQDPLPTVVTQYPIYEPASHTVITPGS
QTAYASTLQAGQRLHLQVSGTLENGVQSEQSRAQLTGQTLQNNLAQVGGQVITVNAQSSA
AANQVAKDVQRIEKVGADGTTQVSFVPVDFSGVPFAAVDPTSLSSFRVPQGEYGLFVKSQ
NPQGRYLIETNPTFTDLSRFMSSDYMLGNLNYNTDQTWRRLGDGLYETRLIRDAVLAQTG
QRFLAAGLTSDYDQYRYLMDNAIASKDQLNLSIGVSLTPAQVASLTHDIVWMETREVQGE
KVLVPVLYLAQAETRNLRGGSLIQGRDMTLIAGGDLTNVGTLRASNDLSVNAGGSLYQGG
LIEANERVSLMAQDSVRNALAGEIRGNQVSVTSIKGDIINDRTAVAVGYGSGNRTILDQG
SQITARQQLDLSAGRDLTNLGQLASAGDAKLSAGRDIDLLAVQDHTFTQSAIRRGLVTND
TVQTLGSSVTTGGNLELNAGRDLAVVASQVSAGNDLSLNAKRDIVIASAQDEQSSTFYQK
KKGSWGKSKTTRSADSSTTNVASEISAGHDLMVNVSQDKDGRISLNGGRDVTVVGSQLKA
GNDLLVGATRDVSLVSAQEQQDSAYSQKKKGSFGLSKSGNSRTSSSTTQVGSELSAGNDA
VVISGANVNLSASSIEAKRDAEVRAGLIDKNGDINLMDAANTSSSQSDKYKSKVGFSSSG
SFTSIASSKKSGQENIQSQSVGSVVSGGRDTTLQASRDVNMIGSTAAAERNLNVGAGRDV
NVLAGSNSSDQSNWKSEKHVGLSLESDRNGVTAFLGSEGLKQKSRNAEQTVAPSQLLAGQ
DATIKAGRDLTLEGSRVDAGRDINLQAGRDISIDAGKETSIEERSKSRDRNGLTVNVSHN
YGNTMDALKGTGKGEDNTSKASSVLSTVDAINQFTSGPTTATHFGTASQSSSSRQEVHSN
SPASLGAGRDISAVAGNDINIRGGQFDAGRDITLVGRDINVDVARGSVSEESKTARSQGG
INGQSGGGSARAGIGGSNGVASEQMNQGTNTPSVFLAGRDVSLEARNNLTLIGTQVQAGR
DIDLGAGNDLTIRAAQNDSSSESSRHSGGGEVGLAVGGKDFISVYASVDMGKGQLDRDNQ
RQQNANLVAGDQLRFSSGKDTTIAGATLRGGEVIGRVGGDLTVSSVPDTGKVSGKEMDAS
VTVSIGLGGGGSVSGSLGMGKTTGKTNWVQEQTSITGKNGVDIRTEKHTQLDGALVAADN
GNLKLDTGTLGFRDISGQDKEHSYYVNAGGTFGWGGGDGAKATGGKDVAFTTDKSQEGKG
KTGASGWSVSGYDYRKEREQEVRATVGAGTITVRNDAKTGADSTAGLNRDVSQAYEITKD
KEKRTDLYVSQSSLDAVGHPLQTLNQWAQGLKDYGKNASAAFTQYGDLTQAADKALADNP
ALAPLAWIPGFLQKVMDESAFYTGGVMPGVISHGGVVTQVPALLTGDMSFYRVQMEYKKD
ANGKVFIDPLSGKPVLDVDATRNSLQSLLTPDDDAAVFTNGIQNSLDAALVNGGMQTGKD
SFIQAYNPEHGFLGDLVESLWDVVLGGAVRSGNARQLSDFLGAGLDQGNKLDVFGHSQGG
LLTYRAIAGLNFNANGNAGSIQLSGAPVGSADFFQAAQNAGFNIDEGAFFQINRPTSTMF
FNTLPVTDTVSDFLGLNVQHSSDPVARFFGSLATAGRLKGADSPHSNYLCVAKDICGGAN
SGLQEIFKKTDKYIIPTLIDQYGNDKLLGSQ
NT seq
9636 nt
NT seq
+upstream
nt +downstream
nt
atggacgtacgcaagccttttgcccaatgcattgccctgtcgttgtcggggatcctgttt
ctcaacccgatcgtcagcgtggccgcaggcctggccctggacccggccgcggggggcaac
gccaccatcggcgcggccggcaatggcgtacccatcgtcaacatcaacgccgccaacggc
gccggcttgtcccacaacaagttcagcgaatacaacgtcggcagcaacggcctgatcctc
aataacggtaccggctcgacccagaacactcagctgggcggctacatcatgggcaacccc
aacctcaaggggcaggcggcccaggtcattctcaacgaagtcaccggcagcaatcgcagc
aagctggcgggctataccgaagtggccgggcagtcggcccgggtgatcgtcgccaacccc
catggcatcacctgcaacggctgcggcttcatcaacaccccacgggccaccctgaccacc
ggcaagccggtgatcgaagggcagaaactcgatcgcttccaggtcgatggcggcgacatc
agcatcgaaggcgccggcctcaacgccagcaacatcgaccagttcgacctgatcacccgc
agtaccaagctcaatgccgacctgtacgccaagaagctcaacgtcatcaccgggcgcaac
gacgtcaaggccgatgacctgagtgtcacggcccgggatgccgacgccagcgccaagccg
gaactggccatcgacagctcggccctgggcggcatgtacgccggggcgatccgcctggtg
ggcacggaaaagggcgtgggggtgaacatgtccggggaaatggcggccagcaccggtgat
atccagatcgacgccaacggcaaggtcacggtcgccggcatgggcgccaaccaggccatc
gccatcaaggcccagagcatcgagctcaagggcaaggcctacgccggcaccgaggcgacc
ctgcaggccgccgagcagatccaggtgcagaccagcctggcggcccgggaccgggtccag
gtggtggacgccgcgcaggtggtcaaccacggcatcatcgaagccggagtcaacaccgac
aacagccgcaacgatcacggcgaggtcaagctgaccgccggcaccctggagaaccgcggc
aacgtactggccagccgcaacctggagctgaccgcgcgccaggccctgaacaaccagaac
ggggtgattcaggggcccaaggtcgaggtcaagaccgcgcgcctggtcaaccagggcgca
caggcccgggtgctggcacagcacgagctggtgctgaccaccccggccatcgccaacctg
ggcggcctgatccgctttggcgagcagcaggccgcgacgctcactctggatagcctgaac
aacaacggcgggcgcctggaagtggcgggcgccgacctgaccctcaaggcccgcgaagtg
agcaaccagaaaggctcgatgattgccgaccgggtagagatcagcgccgggcggctggac
aaccagcagggcctgatcggggccagccagggcagcgccaccttcaaggtcagcgagcag
ttgaacaacaacggtggccagctccaggcccagaccctgctggaaacccagggcgcagag
ttgctcaaccagggcggcaagctgctggccgaccagatcaagatcactggcactcgcctg
gacaacagccagaagggcctggtcagcgccgagaagggcgagttgcaggtgagcctcgcc
caggacctgatcaatgcgggtggcaagctccaggccacatcgctgctcagcctcaagtcc
gccagcgtggataaccgcgctggcaccctggttgctccgcagctgaccctcaccagcagt
ggcaagctcgataaccagggcggcacggtggatgccaccgggcttgagctgcacaccgcg
gacatcgacaaccagggcggcctgctgcaaggcaaggacaacctgctgctggaagcccgg
gacctggccaacaaccagggccaggtgatcggcaacgtactgactgccaacctcgacagc
ctcagccagaaccagggcggggtactcagcgccgaagccggccagctgaccctgacggtc
aagcagcatctgaacaacgccctgggccatttgcaggccaagaacggcgatgtgcagatc
ggctccggcagcctgaacaaccagggcggcgtggtggtgggcaatcaattgctgctgacc
aacaacggccttttggacaaccgtggcgggcaactggtgggcgaccgcctgagcctgagc
acccagcgcctggacaaccagggcgcaggcctgctggcggcgggcagcgacggcttgctg
ctgaccttgactgccgacggcgccaccccggggcagttgctcaacagccaggggcgcctg
caaagcgacgggcatctgcaagtcaacggcggccaactgaacaacagtggcggggtgatc
ctcggcgagagcgtcgggatcaacgccgcgggcctggacaacagcgccaggggcgcagtg
gtggccaagaccggggggctgcatgtggccctcaacaacggcgtattgaacaacagcgca
ggggtcatcgacgccggtgaccaggcactcaaggtcacccaactggcccgtctcgacaac
cagggcggcaccctcaagggcaagcgcctggaggtcgatggcggcgcgctggacaaccgc
caggggcaactgctcgctggcagcgacggcctgaacctggtggccgggggcctgaacaac
gccgaagggatgatcctggcccagggcggccatggtgaagtcaccctgggccagggcagc
ctggacaaccgtggcggcaccctgcagggcgcgaccctcgcggtgacggccggggctgtg
gataacagtgccctgaacggcaaggccggcttgatcagcagccaggccggcaacctgaag
ctggtggtggaccgcctcaccaaccaggcaggcaagctctacgccaacggcctgctcagc
acttccggacagaccctggacaaccgctggggcggcgaaatcagcgcccagcagttggac
ctgaccaccgcggccaacctctacaaccagggcggcctggtggagtcggccggctcgctg
ctgctggtgggcggcaacctggacaacagcgccggcgggcgaatccgcgccgtaggcggg
gagcaaagccggatcagcctgggcggcagcctgtacaaccagggcggtagcctggccctg
ggctccaacgccttcagcctgaatgcgggcaacctgaacaacgtcggcggcagcatcgag
cacgctggcaacggcctgttcaaactcgacctgggcgggctctcgggcctccaggggcgc
atcaccggcctgggccggggcgactgggacatcggctgggtggaccgcagcgggctgatg
cagctcaacggcgccctggacctgagcaccggcggcgatctcaacctcagtgccggcgac
cgtatcgccagcgccagcggcctgcgggtgggcgccgcgaccctgaacaacgccggggaa
ctggccagtgacggctacctgaccctggacctggggggcaacctgaacaacagcggcctg
ctgtcgtcccggggcaagctcacggtgggcgccagcgacctcaaccagaacggcggtcgt
atcgccagcggcggcgacaccgagctgaacctgcgcggcaccctggacaacctgggccgg
ctgatcgccagccagaacctctacgtgtcggcggggcagatcaacaaccgcggcaccctg
ggcgccctggggcagatgcagctgcgctccagcaacggcatcaccacctcggccgacacc
ctgatctacagcggcggcgacatgctcctgcggggcaacggcctggccaacagctacggc
gacatctacagcgccggcaacctcagcttcgccgccctcgacgggggccgcgcggccctg
ctgagcaaccgctccggaaccatcgaaagcgagggcgacatgaacctcaacgtggcgttg
ctgcaaaacgccatggaccagtaccaggtcggcgaaaccatcacccagcgcaatatcgtg
atcaactgcaccgactgttccggcgattaccacaccgccacttacatcgttaacaccacc
tacgaaggcaccatgggcgagcactccgctggcgcccgcctggtgtccaaccgtgacctg
accatcaatgccgatacggtggaaaacgaccagagcctgatcgccgccaaccgcgatgtc
tccatcaccgccaacaacctgtacaaccggggcctgaccctgaacaaacgggtcgagagc
atcagctatttcctgcacggggtttccaagggcgcgttccgcgccgccgagcgcgccacc
atcgcctggaacgccgccaacgccaatcgcgcgccgggccagcaggacccgctgccgacc
gtggtgacccagtacccgatctacgaacccgccagccacacggtgatcaccccgggctcc
cagactgcctacgcctccaccctgcaggccggccagcgcctgcacctgcaggtcagcggc
acccttgaaaacggcgtgcagagcgaacagagccgcgcccagctcaccgggcagacgctg
cagaacaacctggcccaggtcggcggccaggtgatcacggtcaatgcccagagctccgcg
gcggccaaccaggtggccaaggatgtgcaacgcatcgagaaggtcggcgccgacggcacc
acccaggtcagcttcgtcccggtggatttctccggcgtgccgttcgccgccgtggacccg
acctcgctgtcgagcttccgcgtgcctcagggcgagtacggcctgttcgtcaagagccag
aacccccagggccgctacctgatcgagaccaacccgaccttcaccgacctgtcgcgcttc
atgagctcggactacatgctcggcaacctcaactacaacaccgatcagacctggcgccgc
ctgggcgacggcctgtacgagacccggctgattcgcgacgcggtgctggcccagaccggc
cagcgcttcctggcggccgggctgaccagcgactacgaccagtaccgctacctgatggac
aacgccatcgcttccaaggaccagttgaacctgagcatcggcgtgtccctgaccccggcc
caggtggcctcgctgacccatgacatcgtgtggatggaaacccgcgaagtgcagggtgag
aaagtgctggtgccggtgctctacctggcccaggcggaaacccgcaacctgcgcggtggc
agcctgatacaggggcgcgacatgaccctgatcgccggcggcgacctgaccaacgtcggt
accctgcgggccagcaacgacctgagcgtgaatgctggcggcagcctctaccagggcggc
ctgatcgaggccaacgagcgggtcagcctgatggcccaggacagcgtgcgcaacgccctg
gccggggaaatccgcggcaaccaggtcagcgtcacctcgatcaagggcgacatcatcaac
gaccgcaccgcagtggccgtcggctacggctcgggcaatcgcaccatcctcgaccagggc
agccagatcaccgcgcgccagcagctggacctcagcgccggtcgcgacctgaccaacctc
ggccagctcgccagtgccggcgatgccaagctcagcgccggtcgcgacatcgacctgctg
gcggtgcaggaccacaccttcacccagagcgcgatccgtcgcggcctggtgaccaacgac
acggtgcagaccctgggctccagcgtgaccaccggcggcaacctggaactcaatgccggg
cgcgacctggcggtggtagcgagccaggtcagcgccggcaacgacctgtccctcaatgcc
aagcgcgacatcgtcatcgcttcggcccaggacgagcagtcctcgaccttctaccagaag
aagaaaggttcctggggcaagagcaagaccacccgcagcgccgattcctccaccaccaac
gtggcttccgagatcagcgccgggcacgacctgatggtcaacgtcagccaggacaaggac
ggccgtatcagcctcaacggcggacgcgacgtcaccgtggtcggcagccagctcaaggcc
ggcaacgacctgctggtgggcgctacccgggacgtcagcctggtctcggcccaggagcag
caggacagcgcctacagccagaagaagaaaggcagcttcggcctgagcaagagcggcaac
agccgcacctctagcagcaccacccaggtgggcagcgagctgagtgccggcaatgacgcg
gtggtgatatccggggccaacgtcaacctctcggccagttccatcgaagccaagcgcgat
gccgaagtgcgcgccgggctgatcgacaagaacggcgacatcaacctgatggacgcggcc
aacacctccagcagccagagcgacaagtacaagagcaaggtggggttctccagttccggc
agtttcacttcgattgcttcctcgaagaaatccggccaggaaaacattcaatcccagagt
gtcggcagcgtggtcagtggggggcgtgacaccaccctgcaggcatctcgtgacgtcaac
atgatcggcagcacggccgcggccgagcgcaacctgaatgtgggggcggggcgcgatgtc
aacgtgctggccggcagcaacagttcggaccagagcaactggaaatccgagaagcatgtg
gggctgtccctggagagcgatcgcaatggcgtcaccgcgttcctgggcagcgaaggcctc
aagcagaaatcgcgcaatgccgagcagacagtggcgccgagccagttgctggccgggcag
gatgcaaccatcaaggccggacgtgacctgaccctggaaggctcgcgagtggatgccggg
cgtgatatcaacctgcaggccgggcgcgatatcagcatcgacgcgggcaaggaaacctcg
atcgaggaacgtagcaaaagccgtgaccgcaatggcctgacggtcaatgtcagccacaac
tacggcaacaccatggacgccctcaagggcaccggcaaaggcgaggacaacaccagcaag
gcctccagcgtgctgagcaccgtggatgcgatcaaccagttcacctcgggcccgaccacc
gcgacccatttcggtacggccagccagtccagcagctcgcgccaggaagtgcacagcaac
agccctgccagcctgggggccgggcgggatatcagcgccgtggccggcaatgacatcaac
attcgcggtggtcagttcgacgccgggcgcgacatcaccctggtgggccgtgacatcaat
gtggatgtggcccgcggttcggtctccgaagagagcaagaccgcccgcagccagggcggc
atcaatggccagagcggcggtggcagcgcccgtgccggtatcggtggcagcaacggtgtg
gccagcgagcagatgaaccagggcaccaacaccccgtcggtattcctcgccgggcgtgat
gtcagccttgaagcgcgcaacaacctgaccctgatcggaacccaggtccaggccgggcgc
gatatcgacctgggcgccggtaacgacctgaccatccgcgccgcgcagaacgattccagc
agcgagtccagccgccacagcggcggtggtgaagtgggcctggccgtgggcggcaaggac
ttcatctcggtctacgccagcgtcgacatgggcaagggccagttggaccgggacaaccag
cggcagcagaacgccaatctggtagccggcgaccagctgcgcttcagcagtggcaaggac
accaccatcgccggcgccaccctgcgcggtggtgaggtcatcggccgggttggcggtgac
ctgaccgtgtcctcggtgccggataccggcaaggtcagcggcaaggaaatggatgccagt
gtcaccgtgagcatcggcctgggcggcggtggcagcgtcagcggttccctgggcatgggc
aagaccaccggcaagaccaactgggtccaggagcagaccagcatcaccggcaagaacggg
gtggacatccgcaccgagaagcacacccagctcgacggcgcgctggtcgccgccgacaac
ggcaacctcaagctggacaccggcaccctgggcttccgcgatatctccggccaggacaag
gagcacagctactacgtcaatgcgggcggcacctttggctggggcggcggcgatggcgcc
aaggccaccggcggcaaggacgtggccttcaccacggacaagagccaggaaggcaagggc
aagaccggggcgtccggctggagcgtcagcggctatgactaccgcaaggagcgtgagcag
gaagtgcgcgccacggtgggcgcgggcaccatcaccgtgcgcaacgacgccaagactggc
gccgactccactgcgggcctgaaccgcgatgtgtcccaggcctatgaaatcaccaaggac
aaggaaaagcgtaccgacctgtatgtgtcccagtcgtccctggatgcggtgggccatccg
ttgcagaccctcaaccaatgggcccaggggctcaaggactatggcaagaatgcgtccgcg
gcgttcacccagtacggcgatctgacccaggcggcggacaaggccctggcagacaacccg
gcgttggcacctttggcgtggataccggggtttctgcagaaagtcatggatgagtcggcc
ttctacaccggtggcgtgatgccaggtgtcatcagtcatggcggcgtggtcactcaggtc
ccggcgctgctcacgggggacatgagcttttatcgtgtgcagatggagtacaaaaaggat
gccaatggaaaggtctttatcgacccgctatcgggcaagccagtcttggatgtggacgcc
acacgcaacagcttgcagagtttgctgacacctgacgacgacgctgcggtgttcaccaat
ggaatccagaactcgttggatgcagccctggtcaacggcggcatgcaaaccgggaaggac
agttttatccaggcctataacccggagcatggtttcctgggcgacttggtggagtccctg
tgggatgtcgtactgggcggggctgttcgttcgggcaacgcacggcaactcagcgatttc
ctcggggccgggctcgaccagggcaacaagctggatgtattcggccacagccagggcggc
ttgctgacgtaccgggccattgccggactcaacttcaatgccaatggcaatgcgggtagc
atccagctgtcgggcgcgccggttgggtcggcggacttcttccaggccgctcagaatgcc
ggattcaatattgatgagggggcgttcttccagatcaaccggccgacatccaccatgttc
tttaatacgctaccggtgaccgatacggtgtccgacttcttggggctcaatgttcagcac
tcgtctgaccctgttgctcgattcttcgggtctttggccacggctggcaggttgaagggc
gcggatagtccgcactcgaactacctgtgtgtggccaaggatatttgcggcggggctaac
agcgggctacaagagatcttcaagaagaccgacaagtacatcatcccgaccttgatcgat
cagtatggcaacgacaaattgctgggttcgcaatga
DBGET
integrated database retrieval system
