Pseudomonas protegens Pf-5: PFL_0744
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Entry
PFL_0744 CDS
T00249
Name
(GenBank) diguanylate cyclase (GGDEF) domain protein, YfiN family
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFL_0744
Enzymes [BR:
pfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PFL_0744
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SMP_2
DUF7801
Motif
Other DBs
NCBI-ProteinID:
AAY96146
UniProt:
Q4KIQ2
LinkDB
All DBs
Position
869333..870601
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AA seq
422 aa
AA seq
DB search
MKLFKPNARPTLRSVIGRGHLIVALLAISMASLSLTFLGVLALRVYADHNLHLIARSISY
TVEAAVVFNDSVVATEALALIASTEEVADAKVYDSQGQLLASWQRPESGFLTNLEMHVAS
AFLEKPISLPILHQGREIGTINVTGHGGSLLRFLLSGLVGIVLCIALSAWLALYLARRQL
RGITGPLRSLADVAHAARRERAFDQRVPPAEIAELDNLGNDFNALLDELEAWQTHLQSEN
ETLAHQASHDSLTGLPNRAFFEGRLIRALRSANKLNERMAVLFLDSDRFKEINDNFGHAA
GDAVLVAVATRIRAQLREDDLVARLGGDEFAVLLTPLHRVEDAQRIADKIISSMEVPIQL
PGSLSILTSLSIGIAVYPDHGATPGSLLNAADAAMYQAKRGSRGGQHTVGAEPPIVQVQN
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgttcaagcccaacgcccgccctacactgcggtcggtcatcggtcgcggccac
ctgatcgtcgctctgctggcgatctccatggccagcctgtccctgacctttctcggggtg
ttggccctgcgcgtgtacgccgatcacaacctgcacctgatcgcccgctccatcagctac
accgtggaagctgcagtggtgttcaacgacagtgtggtggccaccgaggccctggccctg
atcgcctccaccgaagaggtggccgacgccaaggtgtatgacagccagggccagttgctg
gccagctggcagcgcccggaaagcggctttctgaccaatctggaaatgcacgtcgccagc
gcctttctggaaaagcccatcagcctgccgatcctgcaccaggggcgggaaatcggcacc
atcaatgtcaccggccatggcggcagcctgttgcggtttctcctcagtggcctggtgggc
atcgtgctgtgcatcgccctcagcgcctggttggcgctgtacctggcgcgccgccagctg
cggggcatcaccgggccgttgcgcagcctcgccgatgtggcgcacgcggcccggcgcgaa
cgggccttcgatcagcgggtgccgcctgcggaaatcgccgaactggacaacctgggcaac
gacttcaacgccctgctcgatgagctggaagcctggcagacccatctgcaaagcgagaat
gaaaccctggcccaccaggccagccacgacagcctgaccggcctgcccaaccgggcgttc
ttcgaaggccggctgatccgtgccctgcgcagcgccaacaagctcaacgagcgcatggcg
gtgctgtttctcgacagcgaccggttcaaggagatcaacgataacttcggccacgccgcc
ggcgatgcggtgctggtggctgtggccacgcggattcgcgcgcagttgcgcgaggacgac
ctggtggcgcgcctgggcggggacgaatttgccgtgctgctgaccccgctgcaccgggtc
gaggatgcccagcgcatcgccgacaagatcatcagcagcatggaagtaccgattcaactg
cccggcagcctgtcgatcctgacatcgctgagtatcggtattgccgtgtacccggatcat
ggtgcgacaccgggcagtctgttgaatgccgccgacgcggccatgtaccaagccaagcgc
ggttcgcgaggcgggcaacacacagtgggggcggagccccctatcgttcaggttcaaaac
aggagctaa
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