Pseudomonas protegens Pf-5: PFL_0774
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Entry
PFL_0774 CDS
T00249
Name
(GenBank) transcriptional regulator, RpiR family/SIS domain protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfl03000
]
PFL_0774
Transcription factors [BR:
pfl03000
]
Prokaryotic type
Helix-turn-helix
Other families
PFL_0774
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
LacI
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AAY96176
UniProt:
Q4KIM2
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All DBs
Position
900916..901776
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AA seq
286 aa
AA seq
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MDILYQIRSRLDFLSAGEGRIARLMLDDVGFAASASLDELARRAEVSAATLSRFARSVGC
RDLRQLRLQLAQASGVGSRFLDPAGTPEQSGFYRQIVGDIEAALHQHLAGFEEAQFADAV
RLLGRARMIHAFGMGGCSTLCSSELQVRLVRLGYPIAACHDPVMMRVTAAALGPQHAVIA
CSLTGITPELLEAVALARTYGAGILAITLPDSPLAQLADVLLPLHSAETSFIYKPTAARY
GMLLAIDVLATELALALPDDNQERLRRIKLALDHYRGGDDCLPLGD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctttaccagatccgctcgcgcctggattttctcagcgccggggaagggcgg
atcgcccggctgatgctcgacgatgtgggctttgccgcctctgccagcctcgacgaactg
gcccgccgcgctgaagtcagcgccgccaccctgtcgcgctttgcccgcagcgtcggctgc
cgcgacttgcgccagttgcgcctgcagctggcccaggccagtggggtgggcagccgcttc
ctggaccctgccggcaccccggaacagtccgggttctaccggcagatcgttggcgatatc
gaagctgcgctgcaccagcatctggccggtttcgaggaggcccaattcgccgatgcggtg
cgcctgctggggcgcgcgcggatgatccacgccttcggcatgggcggctgctcgaccctg
tgcagcagcgagttgcaagtgcgcctggtacgcctgggctatcccattgccgcctgccac
gacccggtgatgatgcgcgtcaccgccgccgccctggggccgcagcacgcggtgatcgcc
tgttcgctgaccggcatcacccccgagctgctggaggcggtggccctggcccgtacctac
ggcgccgggatcctggccattaccttgcccgactcgcccctggcgcaattggcggatgtg
ctgctgccgctgcacagcgccgagacctcgttcatctacaaacccaccgcggcccgctac
ggcatgctgttggccattgatgtgctggccaccgagctggccctggccctgcccgatgac
aaccaggaacgcctgcgacggatcaagctggccctggaccattaccgtggcggcgacgat
tgcctgcccctgggagactga
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