Pseudomonas protegens Pf-5: PFL_0802
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Entry
PFL_0802 CDS
T00249
Name
(GenBank) transcriptional regulator, LysR family
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfl03000
]
PFL_0802
Transcription factors [BR:
pfl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFL_0802
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PutA_1st
Motif
Other DBs
NCBI-ProteinID:
AAY96204
UniProt:
Q4KIJ4
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Position
928082..928957
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AA seq
291 aa
AA seq
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MSIKISNLQFFVAVATSQSLTQAAQRLHRTPAAVSLSLKQLEEELGGALFEGERKNQLSP
LGRFVLLEAQRELAHFDRTISTIKTYAKAETGLVRVAAVPSFAITLLPPLLKQFHEQHPQ
FHLDIRDMDSERVVQAVLSGDVDIGIGTVPASIPNIDQDFLFSDAFCVVCASDNPLNRLA
RPLRWSDLDGQNFINSGLGAEINAAEFRHIRDHSTLSVRNTTSLLALVAQGMGVTLLPEL
LSRSAAGDQLNFLRLEDQRIVRSVSVITAPRETLNHASYTFLKALKGSRFA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaagatctccaatttgcagtttttcgtcgcggtggccaccagccagagcctg
acccaggctgcccagcgcctgcaccgcacaccggcagcggtgtcgctctcgctcaagcaa
ctggaagaggaactgggcggcgccttgttcgaaggcgagcgcaagaaccagctcagcccc
ctggggcgtttcgtgctgctggaagcccagcgcgaactggcgcatttcgaccgcaccatc
agcaccatcaagacctacgccaaggccgagaccggcctggtgcgggtggcggcggtgccg
tccttcgccatcaccctgctgccgccgctgctcaagcaattccatgaacagcacccgcag
ttccacctggatatccgcgacatggattccgagcgagtggtgcaagcggtgctcagcggc
gacgtggatatcggcatcggcaccgtaccggcgagcatccccaacatcgaccaggacttc
ctgttctccgatgccttctgcgtggtctgcgccagcgacaaccccctcaaccgcctggcg
cgcccgctgcgctggagcgacctggacgggcagaacttcatcaacagcggcctgggcgcc
gagatcaacgccgccgagttccggcacatccgcgaccactcgaccctcagcgtcagaaac
accacctccttgctggcactggtggcccagggcatgggcgtgaccttgctaccggaactg
ctcagccgttcggcggcgggggatcagctgaatttcctgcgcctggaagaccagcgcatc
gtgcgctcggtgagcgtgatcaccgccccgcgagagacgttgaaccatgcgtcctatacc
ttcttgaaggcgctcaagggcagtcggtttgcttga
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