Pseudomonas protegens Pf-5: PFL_0843
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Entry
PFL_0843 CDS
T00249
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfl03021
]
PFL_0843 (nusA)
03009 Ribosome biogenesis [BR:
pfl03009
]
PFL_0843 (nusA)
Transcription machinery [BR:
pfl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PFL_0843 (nusA)
Ribosome biogenesis [BR:
pfl03009
]
Prokaryotic type
rRNA transcription factors
PFL_0843 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF507
KH_NusA_C
KH_2
DUF2187
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AAY96241
UniProt:
Q4KIF7
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All DBs
Position
971858..973339
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AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPASVIFEALELALATATKKRFEDEVDLRVEINRHTGSYETFR
RWTVVEEADLDDPAVETWLSKARETHPDAKVGDVIEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDENPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIDELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaatgaaaagggtgtaccggca
agcgtaatttttgaagcgctggagctggccctggccactgctaccaagaagcgttttgag
gacgaagtagacctgcgtgtggaaatcaatcgccacaccggttcctacgaaactttccgt
cgctggacggtggtcgaagaagccgacctggatgatccagcggtcgagacctggttgagc
aaggctcgcgaaacccatcccgacgccaaagtcggtgatgtgatcgaagaaaagatcgaa
tccattgagttcggccgcatcgctgcccagaccgccaagcaggtcatcgtgcagaaggtt
cgcgaagccgagcgcgcacaggtagttgatgcctatcgcgagcgcctgggggaaatcatc
tccggcaccgtgaaaaaagtgacacgtgacaacgtgattgtcgacctgggtaacaacgcc
gaggcgttgctggcccgtgaagacatcatctcccgtgagactttccgggttggcgtgcgc
ctgcgcgcgctgctcaaggaaatccgcaccgagaaccgcggcccgcagctgatcctgtcg
cgtaccgcgccggaaatgctgatcgagctgttccgtatcgaggtgccggaaattgccgaa
ggcctgatcgaagtaatggccgcctcccgtgatccgggttcgcgggccaagatcgcagtt
cgctccaaggacaagcgcatcgacccgcagggcgcgtgcattggtatgcgcggttcgcgc
gtccaggccgtttccggtgagttgggtggcgagcgtgtggatatcgtcctgtgggatgag
aacccggcgcagttcgtgatcaacgccatgtcgccggccgaagtcgcggcaattatcgtc
gacgaagatgcccatgccatggacatcgccgttggcgcagacaatctggctcaagccatc
ggtcgtggtggtcagaacgtgcgtctggccagccaactgactggctggaccctgaacgtg
atgaccgaatcggacatccaggccaagcagcaagcagaaaccggcgacatcctgcgcaat
ttcatcgacgagctggaagtcgatgaagaactggcacaggttctggttgatgaaggcttc
accagcctggaagagattgcctacgtaccgctggaagaaatgctcaacatcgacggcttt
gacgaagatatcgtcaacgagcttcgcgctcgggccaaggatcgcttgttgactaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctattgacgacctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccactggttcgagtaa
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