Pseudomonas protegens Pf-5: PFL_0846
Help
Entry
PFL_0846 CDS
T00249
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfl03016
]
PFL_0846 (truB)
Enzymes [BR:
pfl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PFL_0846 (truB)
Transfer RNA biogenesis [BR:
pfl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PFL_0846 (truB)
Prokaryotic type
PFL_0846 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AAY96244
UniProt:
Q4KIF4
LinkDB
All DBs
Position
976448..977365
Genome browser
AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQTREVTVGRADIEAVLPEFRGEIK
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggcatcatcctcctggacaagccg
ctgggcttcacctccaacgcggcgctgcagaaggtccgttggctgctcaacgccgagaag
gccggccacaccggtagcctcgaccccctggccaccggcgttttgccgctgtgctttggc
gaggccaccaagttctcgcaatacctgctcgattccgacaagggttacgaaaccctggct
cagttgggcaagaccaccaccaccgcggacgctgaaggcgaagttttgcagacccgcgaa
gtgaccgttggtcgtgccgatatcgaggcggtattgccggaatttcgtggcgaaatcaag
cagataccgccgatgtactcggccctcaagcgcgatggccagccactctacaaactggct
cgtgcaggggaagtggtggagcgtgaaccgcgttctgttactattgcgcgcttggaattg
ctcgccttcgaaggtgacactgctcgcctggcggtggactgcagcaaaggcacctatatc
cgcaccctggtggaagatatcggtgaaaagctcggctgtggtgcctacgttgcagaactg
cgacggacccaggccggacctttcagcctggcgcagacggtcaccctggaagagcttgaa
gccgtgcacgccgaaggcggcaacgaagcggtagaccgcttcctgatgccatcggacagc
ggtctgctggattggccgctgctgcagttctcggagcacagcgcgttctactggctcaac
ggccagccggtacgtgccccggatgcaccgaagttcggcatggtgcgggtacaggatcac
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
DBGET
integrated database retrieval system
