Pseudomonas protegens Pf-5: PFL_0900
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Entry
PFL_0900 CDS
T00249
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfl03019
]
PFL_0900 (rng)
03009 Ribosome biogenesis [BR:
pfl03009
]
PFL_0900 (rng)
Messenger RNA biogenesis [BR:
pfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PFL_0900 (rng)
Ribosome biogenesis [BR:
pfl03009
]
Prokaryotic type
rRNA processing factors
PFL_0900 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AAY90187
UniProt:
Q4KIA2
LinkDB
All DBs
Position
1043038..1044495
Genome browser
AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFVDI
GLDRAAFIHASEISTREGTAVESISALVHEGQSLVVQVTKDPIGSKGARLTTQLSIPSRY
LVYMPRTAHVGISLKIEDEAERERLKQVVSDCVAQEGIKEAGGFILRTAAEGAGADEIMM
DIRYLRRLWDQIGAQIKTIGAPNVIYEDLGLALRTLRDLVSPKIEKIRIDSRETFQKTTV
FVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVVDPAEAMTTID
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHQRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCSSCQGRGKLKTPETVCYEI
FREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEGFIGRTIRFQVETMYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagattctgatcaacatcacgccgatggaatcacgcgtggcggtggtcgaa
aacggagtgctgcaagaggttcacgtcgagcgcacccagcgccgggggatcgtcggcaac
atctacaagggcaaggtggtgcgggtcttgccgggcatgcaggcggccttcgtcgacatc
ggcctggaccgggcggcgtttatccacgcctcggaaatttccacccgcgaaggcacggcg
gtagagagcatcagcgctctggtgcacgaagggcagagcctggtggtgcaagtcaccaag
gaccccatcggttccaagggcgcgcgcctgaccactcagttgtcgatcccttcccgctat
ctggtgtacatgccgcgtaccgcccatgtcggtatctcgctgaagatcgaggacgaagcc
gagcgtgagcgcctgaagcaggtcgtcagtgattgcgtggcccaggaaggcatcaaggag
gccggtggttttatcctgcgcaccgccgccgaaggcgccggggccgatgagatcatgatg
gacatccgttacctgcgccggctctgggaccagatcggcgcgcagatcaagaccatcggc
gcgcccaatgtgatctacgaggacctgggcctggcgctgcgcaccctgcgcgacctggtg
agcccgaagatcgagaagatccgcatcgactcccgggaaaccttccagaagaccacggtg
ttcgtggccgaactgatgccggaaatcgccgaccgcctggagcactaccccggcgagcgg
ccgatcttcgacctgtacggcgtcgaggacgaaatccagaaagccctggagcgcaaggtg
ccgctcaagtccggaggctacctggtggtagacccggcggaagccatgaccaccatcgac
gtcaacaccggagccttcgtcggtcatcgcaaccttgaggaaaccatcttcaagaccaac
ctcgaggcggccaccgccattgcccggcaactgcgcctgcgcaacctgggcgggatcatc
atcatcgacttcatcgacatggaagatgaagagcaccagcgccaggtattgcgcaccctg
gaaaagcagctggagcgtgatcacgccaagaccaacatcatcggcatcaccgagctgggc
ctggtgcagatgactcgcaagcgtacccgcgagagcctggagcaggtgctgtgcgagcct
tgcagcagttgccaggggcggggcaagttgaaaaccccggaaaccgtctgttacgaaata
ttccgagaaatcctccgcgaggcccgggcttatcaggcagaaggatatcgggtgctggcc
aatcagaaggtggtcgaccggctgctggacgaagagtcgggcaacgtggcggagctggag
ggttttatcggccggaccatcaggttccaggtcgaaaccatgtattcccaggaacaatac
gacgtggtgctgctctga
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