Pseudomonas protegens Pf-5: PFL_1017
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Entry
PFL_1017 CDS
T00249
Symbol
algL
Name
(GenBank) alginate lyase
KO
K01729
poly(beta-D-mannuronate) lyase [EC:
4.2.2.3
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00051
Fructose and mannose metabolism
pfl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
PFL_1017 (algL)
Enzymes [BR:
pfl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.3 mannuronate-specific alginate lyase
PFL_1017 (algL)
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GFIT
Motif
Pfam:
Alginate_lyase
Motif
Other DBs
NCBI-ProteinID:
AAY90304
UniProt:
Q4KHY5
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Position
complement(1163559..1164674)
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AA seq
371 aa
AA seq
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MQSTDLKRLLIPSLLGLAIVTGSAQAAAPLRPPQGYYAPVDKFKSGDNSEGCDAMPAPYT
GALQFRSKYEGSDKARATLNVQSEQAFRDTTADITKIERGTSKRVMQFMRDGRPEQLDCT
LAWLSAWAQADALMSKDFNHTGKSMRKWALGSMASAYLRLKFSDSHPLATHQEQAQKIEA
WFSKMADQVVSDWDNLPLDKTNNHSYWAAWSVMATAVATNRRDLFDWAVKEYKVGANQVD
ADGFLPNELKRQQRALAYHNYALPPLAMIASFAQVNGVDLRQENHEALKRLGERVLAGVK
DPDTFEKKNGKQQDMTDLKVDSKFAWLEPYCSLYTCAPETLERKHKMQPFKTFRLGGDLT
KVYDPAHEKGS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcacagacttgaaacgcttgttgatacccagcctgctggggctggccatcgtc
accggcagcgcccaggccgccgcgccgctgcgcccgccccagggctattacgccccggtg
gacaagttcaagagcggcgacaacagcgagggctgcgacgccatgccggcgccctacacc
ggcgccctgcagtttcgcagcaagtacgaaggctcggacaaggcccgggcgaccctcaac
gtgcagtccgaacaggcctttcgtgacaccaccgcggacatcaccaagatcgagcgcggt
accagcaagcgggtcatgcagttcatgcgcgacggccgccctgaacagctggactgcacc
ctcgcctggctcagcgcctgggcccaggccgatgcgctgatgtccaaggacttcaaccac
accggcaagtccatgcgcaaatgggccctgggcagcatggcctcggcctacctgcggctg
aagttctccgactcccaccccctggccacccaccaggaacaggcacagaagatcgaggcc
tggttcagcaagatggccgaccaggtggtcagcgactgggacaacctgcccctggacaag
accaacaaccactcctactgggccgcctggtcggtgatggccaccgccgtggccaccaac
cgccgcgacctgttcgactgggcggtcaaggaatacaaggtcggcgccaaccaggtcgat
gccgacggcttcttgcccaacgaactcaagcgccagcagcgggccctggcctaccacaac
tacgccctgccgccgctggcaatgatcgccagcttcgcccaggtcaacggcgtcgacctg
cgccaggaaaaccacgaagcactcaagcgcctgggcgagcgggtgctggccggggtcaag
gacccggacaccttcgaaaagaagaacggcaagcagcaggacatgaccgacctcaaggtc
gactcgaaattcgcctggctggaaccctactgcagcctctacacctgcgccccggagaca
ttggagcgcaagcacaagatgcagccgttcaagactttccgcctgggtggcgacctgacc
aaggtctacgacccggcccatgaaaagggctcctga
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