Pseudomonas protegens Pf-5: PFL_1028
Help
Entry
PFL_1028 CDS
T00249
Name
(GenBank) RND transporter, HAE1 family
KO
K18307
multidrug efflux pump
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFL_1028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfl02000
]
PFL_1028
Transporters [BR:
pfl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PFL_1028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AAY90315
UniProt:
Q4KHX4
LinkDB
All DBs
Position
complement(1179770..1182832)
Genome browser
AA seq
1020 aa
AA seq
DB search
MKFTDLFVRRPVLALVVSLLILLAGLKAYSNLPVRQYPLLESSVISVTTDYPGAPAELMQ
GFVTQPINQSLASVEGVDYVSSSSVQGRSLITLRMALNQDSSKTLSEVIAKVNQVKYRLP
EQAYDPVIERSAGDATAVAYVGFASRSLSASALSDYLSRVVQPLFSSIEGVAKVETFGGQ
RLAMRLWLDPQRMAGHGVSAAQVEQAIRANNFQAAPGQIKGQYVISSIQVNTDLSNLDEF
RDMVISNRGDHLLRLRDIARVELGSASYETSALMDGKPAVHLGLYATPKGNPLLIVADIK
RLLPEIQKTLPPGVEVALAFETAHFIQASIIEVIETLIEAILIVVAIIYLCLGSARSVLI
PVVSIPLSMVGALALMHLFGFSINLLTLLAMVLAIGLVVDDAIVVMENIHRHLKEGRTPL
QAAFVGAREIASPVIAMTITLAAVYMPIGLMSGLTGALFKEFALTLAGAVLISGVVALTL
TPVMCATLLPAGQQEGRMSRWAEQFFHWLARLYQHGLVRSLRWRGAVLAFAALVLLSLPW
LYGHASKELAPNEDQGNLLLAIKSPQHANLDYVERYAYQLDAILQGLPETVSTWIINGSD
GVAASFAGVNFSEWSQRQRSAASIQQQLQQEVDAVEGNSIFVFQLPPLPASTGGLPVQLV
IRSTEDYRSLFQAMEEIKQQARASGLFAVVDSDLEFNNPVTEVRIDRSKANSLGIRMQDI
GTTLAVLIGENYTNRFALQGRSYDVIPQSAAAQRLTPQALNGFYVETDSGTQVPLSTVVS
LHDSIQPNKLKQFNQQNAATFQGIPAPGVSLGQAVAFLQQQSQALPASFSHDWQADSRQF
IHEGNALLLTFLFALIVIYMVLAAQYESLSDPLIILITVPLSICGALIPLALGLATINIY
TQIGLVTLIGLISKHGILMVEFANELRAALGCTAAQAIIRAARIRLRPILMTTAAMVVGL
VPLLFSSGAGASSRFGLGLVIVIGMLVGTLFTLFVLPSIYSLMARAHSRSSELEELQQLA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcaccgatctgtttgtccgccgcccggtgctggcgctggtggtcagcctgctg
atcctgctggcggggctcaaggcctacagcaacctgccggtgcgccagtacccgttgctg
gaaagctcggtgatcagcgtcaccaccgactaccccggggcgccggctgagctgatgcag
ggctttgtcacccagccgatcaaccagtccctggcctcggtggaaggggtggactacgtc
agctcgtcctcggtccaggggcgcagcctgatcaccctgcgcatggccctcaaccaggat
tcgtcgaagaccctgagcgaggtgatcgccaaggtcaaccaggtcaagtaccgccttccc
gagcaggcctacgacccggtgatcgagcgttccgccggggacgccaccgccgtggcctat
gtcggtttcgccagccgctcgctgtccgcctcggcgctgagcgactacctcagccgggtg
gtacagccgctgttttccagcatcgagggcgtggccaaggtcgagaccttcggcggccag
cgcctggccatgcgcctgtggctggacccgcagcgcatggccggccacggcgtcagcgcg
gcccaggtggaacaggcgatccgcgccaacaacttccaggccgcccccgggcagatcaag
ggccagtacgtgatctcgtcgatccaggtcaacaccgacctgagcaacctcgacgagttt
cgcgacatggtcatcagcaaccgtggcgaccacctgctgcgcctgcgggacatcgcccgg
gtcgagctgggctcggcgtcctatgaaaccagtgcgctgatggacggcaagccggcggtg
cacctgggcctgtatgccacgcccaagggcaacccgctgctgatcgtcgccgacatcaag
cgcctgctgccggagatccagaagaccctgccgccgggagtggaggtggccctggcgttc
gagaccgcccacttcatccaggcctcgatcatcgaggtcatcgaaaccctgatcgaagcc
atcctgatcgtggtggcgatcatctacctgtgcctgggctcggcccgcagcgtgctgatc
ccggtggtcagcattccgctgtcgatggtcggcgcactggcgctgatgcacctgttcggc
ttcagcatcaacctcctgactctgctggccatggtcctggccatcggcctggtggtggac
gatgccatcgtggtcatggagaacatccaccgccacctcaaggagggtcgcacgccgttg
caggcggcctttgtcggggcccgcgaaatcgcctcgccggtgatcgccatgaccatcacc
ctggctgcggtgtacatgcccatcggcctgatgagcgggctgaccggcgcgctgttcaag
gagttcgccctgaccctggccggcgcggtgctgatctccggggtagtggccctgaccctg
accccggtgatgtgcgccacgctgctgccggcggggcagcaggaaggccgcatgagccgc
tgggccgagcagttcttccactggctggcacgtctctaccagcacggcctggtgcgttcc
ctgcgctggcgcggcgcggtcctggcgtttgccgccctggtgctgctcagcctgccgtgg
ctctacggccacgccagcaaggagctggcgcccaacgaagaccagggcaacctgctgctg
gcgatcaagtcgccgcagcacgccaacctggactatgtcgagcgctatgcctaccagctg
gacgcgatcctccagggcctgccggaaaccgtcagcacctggatcatcaatggcagcgac
ggcgtggctgccagtttcgccggggtcaacttcagcgagtggtcgcaacgccagcgcagc
gcggccagcatccagcagcagttgcagcaggaggtcgatgcagtcgagggcaactcgatc
ttcgtcttccagttgccgccgctgccggcctccaccggcggcctgccggtgcaactggtg
atccgcagcaccgaggactaccgctcgctgttccaggccatggaggagatcaagcagcag
gcccgggccagcggcctgttcgcggtggtggacagcgatctggagttcaacaacccggtg
accgaggtgcgcatcgatcgcagcaaggccaacagcctgggcatccgcatgcaggacatc
ggcaccaccctggcggtgctgatcggcgagaactacaccaaccgcttcgccctgcagggc
cgctcctacgacgtgattccccagagcgccgcggcccagcgcctgacaccccaggccctc
aacggcttctacgtggagaccgacagcggcacccaggtgccgttgtccaccgtggtcagc
ctgcatgacagcatccagcccaacaagctcaagcagttcaaccagcagaatgccgcgacc
ttccagggcatccccgccccgggggtcagcctgggccaggcggtggccttcctgcagcag
caaagccaggccctgcccgccagtttcagccatgactggcaggccgattcgcggcagttc
atccacgaaggcaatgccctgctgctgactttcctgttcgccctcatcgtgatctacatg
gtgctggccgcgcagtacgaaagcctgagcgacccgctgatcatcctgatcaccgtgccg
ctgtcgatctgtggcgcgctgattcccctggcgctggggctggcgaccatcaatatctac
acgcagatcggcctggtgaccctgatcggcctcatcagcaagcacggcatcctgatggtg
gagttcgccaatgaactgcgcgccgccctgggctgcactgcggcccaggcgattatccgc
gcggcacggatccgcctgcggccgatcctcatgaccaccgccgccatggtggtggggctg
gtgccgctgctgttttcttccggcgccggcgccagcagccgtttcggcctggggctggtg
atcgtcatcggcatgctggtgggcaccctgttcaccctgttcgtgctgccgtcgatctac
agcctgatggcacgcgcccacagtcgctccagcgagctggaggaactgcagcaactggcc
tga
DBGET
integrated database retrieval system
