Pseudomonas protegens Pf-5: PFL_1033
Help
Entry
PFL_1033 CDS
T00249
Name
(GenBank) WD-repeat family protein
KO
K20332
toxoflavin biosynthesis protein ToxC
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFL_1033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
DUF1513
WD40_like
Ge1_WD40
BBS2_Mid
PD40
Nup160
Motif
Other DBs
NCBI-ProteinID:
AAY90320
UniProt:
Q4KHW9
LinkDB
All DBs
Position
complement(1186479..1188182)
Genome browser
AA seq
567 aa
AA seq
DB search
MRHFGPISGIATFKDTYVATAGYDNQVILWDARTRTPIQRVLHDHLANQCAFNAAGTLLV
SASSDYTARVWEVPSLRLKTVLIGHDDDIEMAAFSPDGQTIATCSRDHSIRLFNLSGQTL
RILHGHTADVISVCWSADGQTLVSSSDDGSIRRWDANTGQQLETIDLGGVETDTVALSRE
GIIFAGDDEGKISIISPRGTLLQPAHSAGIKRIIWDDSQRLLISLSYDRSVMLWHLKQDG
TLVKTAETSLPSIIWPRSCALLGSHRIAFVTFGSRYATWDFATQTWDLSGIEPAVSLNAV
AVVGEDVYSIGDAGILHINGQPSIKAGSLCNFLLPFGDSVLTGGQMGTVFDARTGATLYQ
HRSPLNCGTTFIKDGALHAAIGTYTGEALIFCLDQQQPRFVTQVRMHENAIKGIAADETY
IFSVCATAAAAFFRIADFGLETYLDKAHERISNGCTQIQGGFASIGRDLKLRLWRDGASE
VFDTPHSHSIKCIAISRDRSMIATGSYGGTVAVFDLKKRVWASVEKPTASGISCLIHDAS
GEGFLASAYDGRIYPITPRAAVQSARP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagacatttcgggcccatcagcggcatcgccacgttcaaggacacctacgtcgccacc
gccggctacgacaaccaggtgatcctctgggatgccaggacccggaccccgatccagcgg
gtccttcacgatcacctggccaaccagtgcgcattcaacgccgccggcacgctgctggta
agcgccagcagcgactacaccgcgcgggtctgggaagtgccgtccctgcgcctgaagacc
gtgctcatcggccatgacgacgacatcgagatggccgccttctccccggacggccagacc
atcgccacctgctcccgggaccacagcatccgcctgttcaacctcagcggccagaccctg
cggatcctccacggccacaccgccgacgtgatctcggtgtgctggtcggccgacggccag
accctggtgtcgagcagcgatgacggttcgatccggcgctgggatgccaataccgggcaa
cagctggaaaccatcgacctgggcggcgtggaaaccgacaccgtggccctgtcccgcgag
ggcatcattttcgccggcgacgacgaaggcaagatctccatcatcagcccccgcggcacc
ctgctgcagcccgcccacagcgccgggatcaagcgcatcatctgggacgacagccagcgc
ctgctgatcagcctcagctacgaccgctcggtcatgctctggcacctcaagcaggacggc
accctggtcaagaccgcggaaacctccctgccgagcatcatctggccacgcagttgcgcg
ctgctgggcagccatcgcatcgccttcgtcaccttcggctcacgctatgccacctgggat
ttcgccacccagacctgggacctcagcggcatcgaaccggcggtcagcctcaacgccgtg
gcggtggtcggcgaagacgtctacagcatcggcgacgccggcatcctgcacatcaacggc
caacccagcatcaaggccggcagcctgtgcaacttcctcctgccctttggcgacagtgtg
ttgaccggcggccagatgggcacggtgttcgacgcccgcaccggcgccaccctgtaccag
caccgctcgcccctgaactgcggcaccaccttcatcaaggacggagccttgcacgcagct
atcggcacctacaccggcgaagcgctgatcttctgcttggaccagcagcagccgcgcttc
gtcacccaggtgcgcatgcatgagaacgccatcaaaggcatcgccgccgatgaaacctac
attttcagcgtgtgcgccaccgcagccgcggccttcttccggattgccgacttcggcctg
gaaacctacctggacaaggcccacgagcggatctccaacggctgcacgcagatccagggc
ggcttcgccagcatcggtcgcgacctgaaactgcgcctgtggcgcgatggcgccagcgag
gtgttcgacacgccccacagccactcgatcaagtgcatcgccatctcccgcgaccgctcg
atgatcgccaccggtagctacggcggcaccgtggccgtcttcgatctgaaaaagcgcgtc
tgggccagcgtggagaaacccaccgccagcggcatttcctgcctgatccatgacgccagc
ggcgaaggtttcctggccagcgcctacgacggccggatctacccgatcacgccccgggcc
gctgtccagtcggcgcgcccatga
DBGET
integrated database retrieval system
