KEGG   Pseudomonas protegens Pf-5: PFL_1071
Entry
PFL_1071          CDS       T00249                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pfl  Pseudomonas protegens Pf-5
Pathway
pfl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PFL_1071 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfl03019]
    PFL_1071 (rnc)
   03009 Ribosome biogenesis [BR:pfl03009]
    PFL_1071 (rnc)
   03036 Chromosome and associated proteins [BR:pfl03036]
    PFL_1071 (rnc)
Enzymes [BR:pfl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PFL_1071 (rnc)
Messenger RNA biogenesis [BR:pfl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PFL_1071 (rnc)
Ribosome biogenesis [BR:pfl03009]
 Eukaryotic type
  90S particles
   RNase
    PFL_1071 (rnc)
 Prokaryotic type
  rRNA processing factors
   PFL_1071 (rnc)
Chromosome and associated proteins [BR:pfl03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PFL_1071 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase
Other DBs
NCBI-ProteinID: AAY90358
UniProt: Q4KHT1
LinkDB
Position
1222966..1223655
AA seq 229 aa
MSVSLSRLERQLGYSFKDQELMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMETARDRVLSWLASEFESLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEVTLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgtttctttgagccgtctcgagcgtcagctcggttattccttcaaggaccaggag
ctgatgctgctggccctcactcaccgcagctttgccgggcgcaacaacgaacgcctggag
tttctcggtgacgccattctcaacttcgttgccggcgaggcgctgttcgagcgctttccc
caggcccgcgaaggccagttgtcgcgtttgcgcgcgcgtctggtgaaaggtgaaacactg
gcggtgctggcccgtggtttcgacctgggcgagtacctgcgcctgggctccggcgaattg
aagagcggcggtttccgtcgtgagtcgatccttgccgatgccctggaggccctgattggt
gcgatctacctggacgccggcatggagactgcccgtgaccgcgtgctgtcctggctggcc
tcggagtttgagagcctgaccctggtggacaccaacaaggaccccaagacccggctgcag
gaattcctccagtcccgcgcctgcgaattgccacgctacgaagtggtggatattcagggc
gaaccgcattgccggacattcttcgttgaatgtgaagtcaccttattgaatgaaaaaagc
cgaggtcagggtgtgagccgccgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggcgtggagaatggccatgactga

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