Pseudomonas protegens Pf-5: PFL_1101
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Entry
PFL_1101 CDS
T00249
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfl03036
]
PFL_1101 (xerD)
Chromosome and associated proteins [BR:
pfl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PFL_1101 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
MrpR_C_cat
Motif
Other DBs
NCBI-ProteinID:
AAY90388
UniProt:
Q4KHQ1
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All DBs
Position
1256663..1257559
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AA seq
298 aa
AA seq
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MPAIDHPLIDRFLDALWLEKGLSDNTRDAYRSDLALFNGWLQEQGLELPRAGRELILDHL
AWRVEQAYKPRSTARFLSGVRGFYRYLLREKLIEIDPTLQIDMPQLGRPLPKSLSEADVE
ALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLV
PMGEEAIVWVERYMRDARAELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGIGKA
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDLHAKHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccatcgaccaccccctgatcgaccgttttctcgacgccctgtggttggagaaa
ggcctgtccgacaacacgcgcgacgcctatcgcagtgacctggcgttgttcaacggctgg
ttgcaggagcaggggctggagttgccgcgggccgggcgcgagctgatcctcgatcacctg
gcctggcgcgtggagcaagcctacaagccccgctcgacagcgcgattcctctcgggcgtg
cgtggtttctatcgctatctgctgcgggaaaagctgattgaaatcgatcccaccttgcag
atcgacatgccgcaactggggcgtccgttgcccaagtcgctgtcggaggcggatgtggaa
gcgctgctggccgcgccggacctgagcgaggccatcggccagcgcgaccgggccatgctc
gaagtgctctatgcctgcggcctgcgggttaccgagctgatcagcctgaccctggagcag
gtcaacctgcgccagggcgtgctgcgggtcatgggcaagggcagcaaggagcgcctggtg
cccatgggcgaggaggcgattgtctgggtcgagcgctacatgcgtgatgctcgtgccgag
ctgctgggcgggcgccccagcgacgtgctgttccccagcctgcgtggcgagcagatgacc
cgccagaccttctggcatcggatcaagcaccaggccaaggtcgccgggatcggcaaggcg
ctgtcgccccacaccttgcgccatgccttcgctacccatctgctcaatcacggcgccgac
ctgcgagtggtgcagatgctgttgggccatagcgatctgtccaccacccagatctatacc
catgtggcccgcgcccggctgcaggatctgcacgccaagcaccatccgcgcggttga
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