Pseudomonas protegens Pf-5: PFL_1368
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Entry
PFL_1368 CDS
T00249
Name
(GenBank) conserved hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFL_1368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfl02000
]
PFL_1368
Transporters [BR:
pfl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PFL_1368
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AAY90653
UniProt:
Q4KGY6
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All DBs
Position
1545546..1546754
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AA seq
402 aa
AA seq
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MAATQPVTLRVLGTSVTLLESLRVRAEQDLGIRLVYQVHDVEQAQRIAVMQPDSYDLYDQ
WFHNVDFVWPAQAIQPIDTRRIALWHEINDLPKRGRLSPDDRLGSGSVPSERLYVQHDGS
LGSTASERISMLPLTHNADSFAYRPERLPAGFSSANESWGWLLEPAWSGRIALQSDAAIG
ALDAALAVQGCGLESFKDIGNLSIEEIDRLAGILVRKQREGHFAAFWSDDEEAAQLMLSP
RIDIQSLWSPTLMRLHRAGVKYRLAVPKEGYRAWFGGLSLSRHAKGAVLDAAYAYLNWWL
SGWPGAVMARQGYYIGNPARTRDHLSSAEWDYWYAGKPAREELPGSDGEPLIDIGETRDG
GSYQQRMGHIAVWNSVMDEHNYLVRRWGDFLRAGRVAGRGKG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgcaaccagtcaccctgcgggtgctgggcacctcggtgaccctgctcgaa
tccctgcgggtgcgtgccgagcaggacctgggcatccgcctggtgtatcaggtacacgat
gtggagcaggcccagcgcatcgcggtgatgcagccggacagctacgacctctatgaccag
tggtttcacaacgtcgattttgtctggccggcccaggcgatccagcccatcgatacccgg
cgcattgccctgtggcacgagatcaacgacctgcccaagcgcgggcgcctgtcgccggac
gatcgcctgggcagtggcagcgtgcccagcgaacggctctatgtgcagcacgacggtagc
ctgggcagcacggccagcgagcgcatcagcatgctgccgctgacccacaacgccgacagt
ttcgcctaccgcccggagcgcctgccggcgggtttttccagcgccaacgaaagctggggc
tggctgctggagccggcctggagcgggcgcattgccttgcagagcgatgcagcgatcggt
gccctggacgccgccctggcggtgcagggctgtggcctggaatccttcaaggacatcggc
aacctgagcatcgaagagatcgaccggctggcagggatcctggtgcgcaagcagcgtgaa
gggcatttcgcggcgttctggtcggacgatgaagaggccgcgcaattgatgctcagcccg
cgcatcgatatccagagcctgtggtcgccgacgctgatgcgcctgcaccgggcgggggtc
aaataccgcctggcagtgccgaaggaaggctaccgcgcctggttcggcgggctgtcgttg
tcgcgccacgccaagggcgcggtgctggatgcagcctatgcctacctcaactggtggctg
tcgggctggcccggtgcggtgatggcacgccagggctactacatcggcaacccggcgcgt
acccgcgatcacctgagcagcgccgagtgggattactggtacgccggcaaaccggcccgg
gaagagttgccgggtagcgacggcgaaccgctgatcgatatcggcgagacccgcgatggc
ggttcctaccagcagcgcatggggcatatcgccgtgtggaactcggtgatggacgagcac
aactacctggtgcggcgctggggggatttcctgcgggcggggcgggtcgcgggccggggc
aaaggctga
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