Pseudomonas protegens Pf-5: PFL_1722
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Entry
PFL_1722 CDS
T00249
Symbol
sucD
Name
(GenBank) succinate-CoA ligase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00020
Citrate cycle (TCA cycle)
pfl00640
Propanoate metabolism
pfl00660
C5-Branched dibasic acid metabolism
pfl00720
Other carbon fixation pathways
pfl01100
Metabolic pathways
pfl01110
Biosynthesis of secondary metabolites
pfl01120
Microbial metabolism in diverse environments
pfl01200
Carbon metabolism
Module
pfl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PFL_1722 (sucD)
00640 Propanoate metabolism
PFL_1722 (sucD)
00660 C5-Branched dibasic acid metabolism
PFL_1722 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
PFL_1722 (sucD)
Enzymes [BR:
pfl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
PFL_1722 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AAY91017
UniProt:
Q4KFY5
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All DBs
Position
1928883..1929764
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AA seq
293 aa
AA seq
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MSVLINKDTKVICQGITGSQGSFHTQQAIEYGTKMVGGVTPGKGGTEHLGLPVFNTVKDA
VAATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDELGVTLI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTGWAVK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctgatcaataaagacaccaaagttatctgccagggtattaccggttcgcaa
ggtagtttccacacccagcaagccatcgagtacggcaccaagatggttggcggcgtaact
cctggcaaaggcggcaccgagcacctgggcctgccagtgttcaacaccgtgaaagacgct
gtagctgccactggcgctaccgccagcgtgatctacgttccagctcctttctgcaaggac
tcgatcctggaagcggccttcggcggcatcaagctgatcgtctgcatcaccgaaggcatt
cctaccctggacatgctggacgccaaggttaagtgcgacgagctgggtgttaccctgatc
ggccctaactgcccaggcgtgatcaccccaggcgaatgcaagatcggcatcatgccaggt
cacattcacttgccaggcaaggtcggtatcgtttcccgttccggcaccctgacctacgaa
gctgttaagcagactactgacgccggttttggtcagtccacctgtgtcggcatcggtggt
gacccgatcccgggttcgaacttcatcgacatcctgaagctgttccaggaagacccgaag
accgaagcgatcgtgatgatcggtgagatcggcggttcggctgaagaagaagcggctgcc
tacatcaaggctcacgtgaccaagccggttgtttcctacatcgctggtgtgactgctcct
ccgggcaagcgcatgggccatgctggcgcaatcatctctggcggcaaaggcactgcagac
gagaaattcgctgctctgcaagacgccggcgtgaaaaccgtgcgttcgctggcagacatc
ggcaaggccctggccgagctgaccggttgggctgtcaagtaa
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