Pseudomonas protegens Pf-5: PFL_1836
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Entry
PFL_1836 CDS
T00249
Name
(GenBank) putative 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00071
Fatty acid degradation
pfl00280
Valine, leucine and isoleucine degradation
pfl00310
Lysine degradation
pfl00362
Benzoate degradation
pfl00380
Tryptophan metabolism
pfl00410
beta-Alanine metabolism
pfl00640
Propanoate metabolism
pfl00650
Butanoate metabolism
pfl00907
Pinene, camphor and geraniol degradation
pfl00930
Caprolactam degradation
pfl01100
Metabolic pathways
pfl01110
Biosynthesis of secondary metabolites
pfl01120
Microbial metabolism in diverse environments
pfl01200
Carbon metabolism
pfl01212
Fatty acid metabolism
Module
pfl_M00087
beta-Oxidation
pfl_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PFL_1836
00650 Butanoate metabolism
PFL_1836
09103 Lipid metabolism
00071 Fatty acid degradation
PFL_1836
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PFL_1836
00310 Lysine degradation
PFL_1836
00380 Tryptophan metabolism
PFL_1836
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PFL_1836
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PFL_1836
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PFL_1836
00930 Caprolactam degradation
PFL_1836
Enzymes [BR:
pfl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PFL_1836
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PFL_1836
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PFL_1836
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
UDPG_MGDP_dh_N
F420_oxidored
DUF1731
Motif
Other DBs
NCBI-ProteinID:
AAY91125
UniProt:
Q4KFM7
LinkDB
All DBs
Position
2036007..2038151
Genome browser
AA seq
714 aa
AA seq
DB search
MTDAIRYEKGQDQIVVLTIDMPGQSANTMNALYRDAMAGAVARLQAERESIAGVIITSAK
KTFFAGGDLNELIKVGRPEAKAFYGMVLALKGQLRALETLGKPVVAAINGAALGGGWEIC
LACHHRVALDDKSVQVGLPEVTLGLLPGGGGVVRMVRMLGLEKALPYLLEGKKVRPQQAL
QAGLIDALATDRDDLLAKARAWILANPGAQQPWDVRGYQIPGGTPSNPKVAQMLAIAPSI
LRTKTQGCFPAPEKILCAAVEGAQVDFDTAQLIETRYFTELTTGQVAKNMIGTFWFQLNQ
INAGSSRPQGVPPQVTKKLGVLGAGMMGAGIAYVSAVAGIEVVLKDISPEAAEKGKAHSA
ALLEKKVARGQLSREQRDATLARIRTTAEDADLAGCDLIIEAVFEDRELKAKVSRAAQQV
VGGDAVIASNTSTLPITGLATAVPNPDKFIGLHFFSPVEKMPLVEIIKGAKTSDETLARG
FDFVLQIKKTPIVVNDSRGFFTSRVFGTFTNEGIAMLGEGIAAPMIETEARKAGMPVGPL
AISDEVSLSLMSHIRQQTAKDLQAEGKPAIEHPAFAVIDLLLNEYKRPGKAAGGGFYDYP
AGAQKHLWPQLRTRFYKADGQISPQDVRDRLLFVQAIETVRCVEEGVLHSTADANIGSIF
GIGFAAWSGGALQFINQYGVQDFVARAQYLAEQYGERFRPPTLLLEKARLGQLF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccatccgttacgaaaaaggccaggaccagatcgtcgtcctgaccatcgat
atgccgggccagagcgccaacaccatgaatgccctgtaccgcgacgccatggccggtgcc
gtggcgcgcttgcaggccgaacgggaatcgattgccggggtgatcatcacctcggcgaaa
aagaccttcttcgccggcggtgacctcaatgagctgatcaaggtcggcaggcccgaggcc
aaggctttctacggcatggtgctggccctcaagggccagctgcgagccctggaaaccctg
ggcaagccggtggtcgctgcaatcaatggcgcggccctgggcggcggctgggaaatctgc
ctggcctgccatcatcgcgttgccctggacgataaatcggtacaggtcggcctgccggaa
gtcaccctgggcctgttgcccggcggcggcggggtagtgcgcatggtgcgcatgctgggc
ctggaaaaggctctgccctatctgctggaaggcaagaaagtgcgcccgcagcaggcgttg
caagcaggcctgatcgatgccctggcgacggaccgcgacgacctgctggccaaggctcgg
gcctggatcctcgccaacccgggcgcgcagcagccctgggatgtgcgcggctaccagatc
cctggtggcacgccgtcgaacccgaaggttgcgcagatgctggccatcgccccatcgatt
ctgcggaccaagacccagggttgcttccccgcgccggaaaagatcctctgcgctgcggtc
gaaggtgcccaggtggatttcgacaccgcgcaactgatcgagacccgttacttcaccgag
ctgaccacaggccaggtggcgaagaacatgatcggcaccttctggttccagctcaaccag
atcaatgccggcagctcacggccacagggcgtgccgccgcaggtcacgaaaaagctcggg
gtgcttggcgccggcatgatgggcgcgggcattgcctatgtcagtgcggtggcgggtatc
gaggtggtgctcaaggacatcagccccgaggcggccgagaagggcaaggcccactcggcg
gcgctgctggagaaaaaggtggctcgcgggcagttgagccgcgagcagcgggacgccacc
ctggcgcggatccgcaccaccgccgaggatgccgacctggccggttgcgacctgatcatc
gaggcggtgttcgaggatcgcgagctcaaggccaaggtctcccgggctgcgcagcaggtg
gtcggcggtgacgcggtgatcgcctccaacacttcgaccctgcccatcactggcctggct
acggcagtgccgaacccggacaagttcattggcctgcatttcttcagcccggtggaaaaa
atgcccctggtggaaatcatcaagggggcgaaaaccagcgatgaaaccctggcccgcggc
ttcgactttgtcttgcagatcaagaagaccccgatcgtggtcaatgacagccgcggcttc
ttcacctcccgggtgttcggcactttcaccaacgaaggtatcgccatgctcggcgagggc
atcgcggcgccgatgatcgagaccgaagcgcgcaaggccgggatgccggtggggccgctg
gcaatttccgacgaggtttccctgagcctgatgagccatatccgccagcagaccgccaag
gacctgcaggccgagggcaagccggccatcgaacatccggcatttgccgtgatcgacctg
ctgctcaacgaatacaagcgcccgggcaaggcggccggtggcggtttctacgattatccg
gccggtgcccagaagcatttgtggccgcagttgcgcacgcgcttctacaaggccgacggg
cagatctcgccccaggatgtgcgggatcgcttgctgttcgtccaggccatcgagaccgtg
cgttgtgtggaggagggagtgttgcactccacggcggacgccaacatcggctcgatcttc
ggcatcggctttgccgcctggagcgggggcgccctgcagttcatcaatcagtacggggtg
caggatttcgtcgcccgtgcgcagtacctggccgagcaatatggcgaacgtttccggccg
ccgacgctgcttctggaaaaggctcgcctgggccagttgttctga
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