Pseudomonas protegens Pf-5: PFL_1888
Help
Entry
PFL_1888 CDS
T00249
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase, molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00230
Purine metabolism
pfl01100
Metabolic pathways
pfl01120
Microbial metabolism in diverse environments
pfl01232
Nucleotide metabolism
Module
pfl_M00958
Adenine ribonucleotide degradation, AMP => Urate
pfl_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PFL_1888 (xdhB)
Enzymes [BR:
pfl01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
PFL_1888 (xdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
DUF3079
Motif
Other DBs
NCBI-ProteinID:
AAY91175
UniProt:
Q4KFH6
LinkDB
All DBs
Position
complement(2101952..2104351)
Genome browser
AA seq
799 aa
AA seq
DB search
MSNHHKVEKTQAELTALFHQDLTSGVGRSVKHDSADKHVSGEAVYIDDRLEFPNQLHVYA
RLSDRAHAKVISIDTAPCYAFEGVRIAITHEDIPGLKDIGPLLPGDPLLAIDTVEFVGQP
VLAVAARDLETARKAAMAAIIEYEDLEPVLDVVEALRKRHFVLDSHTHQRGDSASALASA
EHRIQGTLHIGGQEHFYLETQISSVMPTEDGGMIVYCSTQNPTEVQKLVAEVLDVSMNKI
VVDMRRMGGGFGGKETQAASPACLCAVVARLTGQPTKMRLPRVEDMLMTGKRHPFYVEYD
VGFDSSGRLHGIQLELAGNCGCSPDLSASIVDRAMFHSDNSYYLGDATINGHRCKTNTAS
NTAYRGFGGPQGMVAIEEVMDAIARHLHLDPLAVRKANYYGKTERNVTHYYQTVEHNMLE
EMTAELEASSQYAERREAIRLYNANSPILKKGLALTPVKFGISFTASFLNQAGALIHVYT
DGSIHLNHGGTEMGQGLNIKVAQVVAEVFQVNIDRVQITATNTDKVPNTSPTAASSGADL
NGKAAQNAAQTIKNRLVEFAARKYQVSEEDVEFHNGHVRVREHILTFEELIQQAYFAQVS
LSSTGFYKTPKIYYDRAQARGRPFYYFAFGAACAEVIVDTLTGEYKMLRTDILHDVGASL
NPAIDIGQVEGGYIQGMGWLTTEELVWNTKGKLMTCGPASYKIPAVADMPLDLRVKLVEN
RKNPEDTVFHSKAVGEPPFMLGIAAWCAIKDAVASLGDYRHQPQIDAPATPERVLWGCEQ
MRRLQVTRAADPQAELAPL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcatcacaaggtcgagaagacccaggccgaactcacggccctgtttcaccag
gacctgaccagcggcgtcggccgcagcgtcaagcacgacagcgccgacaaacatgtgtcc
ggcgaagcggtgtacatcgacgaccgcctggaattccccaaccagttgcacgtctacgcg
cgactgtcggaccgggcacacgccaaggtcatcagcatcgacaccgccccctgctacgcc
ttcgaaggcgtgcgcatcgccattacccacgaggacattcccggcctcaaggatatcggc
ccgctgctgcccggcgacccgctgctggccatcgacaccgtggagttcgtcggccagccg
gtgctggcggtggccgccagggacctggaaaccgcgcgcaaggcggccatggccgcgatc
atcgaatacgaagacctggagccggtgctcgacgtggtcgaggccctgcgcaagcgccac
ttcgtgctggacagccacacccaccagcgcggcgactcggccagcgccctggccagtgcc
gagcaccgcatccagggcacgctgcacatcggcggccaggaacacttctacctggaaacc
cagatctcctcggtgatgcccaccgaagacggcggcatgatcgtctactgctcgacccag
aaccccaccgaagtgcagaagctggtggcggaagtgctggacgtctcgatgaacaagata
gtggtggacatgcggcgcatgggcggcggcttcggcggcaaggaaacccaggccgccagc
cccgcctgcctgtgcgcggtggtggcacgcctgaccggccagccgaccaagatgcgcctg
ccacgggtcgaagacatgctgatgaccggcaagcgccaccctttctacgtcgaatacgac
gtgggcttcgacagcagcgggcgcctgcacggcatccagctggaactggcgggcaactgc
ggctgttcaccggacctctcggcatccatcgtcgaccgtgccatgttccactccgacaac
tcgtactacttgggcgatgccaccatcaacggccaccgctgcaagaccaacactgcgtcg
aacactgcctatcgcggcttcggtggcccgcagggcatggtcgccatcgaggaggtgatg
gacgccatcgcccgccatctgcacctggaccctctggcggtacgcaaggccaactactac
ggcaagaccgagcgcaacgtcacccactactaccagaccgtcgagcacaacatgctcgag
gaaatgaccgccgaactggaagccagcagccagtacgccgagcgccgcgaagccatccgc
ctgtacaacgccaacagcccgatcctgaaaaagggcctggcactgaccccggtgaaattc
ggtatttccttcaccgccagcttcctcaaccaggccggcgcgctgatccatgtctacacc
gacggcagcatccacctgaaccacggcggcaccgaaatgggccagggcctgaacatcaag
gtggcgcaagtggtggccgaggtattccaggtgaacatcgaccgggtgcagatcaccgcc
accaataccgacaaggtgcccaatacctcgcccaccgccgcttccagtggtgccgacctg
aacggcaaggccgcgcagaacgcggcgcagaccatcaagaaccgcctggtggaatttgcc
gcgcgcaagtatcaggtcagcgaagaagatgtggaattccacaacggccacgtgcgggtc
cgcgagcatatcctgaccttcgaggaactgatccagcaggcctattttgcccaggtgtcg
ctctccagcaccggcttctacaagaccccgaaaatctactacgaccgtgcccaggcccgg
ggccggccgttctactacttcgccttcggcgcggcctgcgccgaggtgatagtcgacacc
ctgaccggcgagtacaagatgctgcgcaccgacatcctgcatgacgtcggcgcctcgctg
aacccggccatcgacatcggccaggtcgagggcggctacatccagggcatgggctggctg
accaccgaggaactggtgtggaacaccaagggcaagctgatgacctgcggcccggccagc
tacaagatcccggcagtggccgacatgcccctggacctgcgagtcaagctggtggaaaac
cgcaagaacccggaagacacggtgttccattccaaggccgtgggcgaaccgccgttcatg
ctgggtatcgccgcctggtgcgcgatcaaggatgcggtggcgagcctcggcgactaccgc
caccagccgcagatcgatgcgccggcgacaccggagcgagtgttgtggggctgcgagcag
atgcgtcgcttgcaggtgaccagggccgcggacccgcaagccgagctggcgccgctgtaa
DBGET
integrated database retrieval system
