Pseudomonas protegens Pf-5: PFL_2882
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Entry
PFL_2882 CDS
T00249
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00500
Starch and sucrose metabolism
pfl01100
Metabolic pathways
pfl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PFL_2882 (glgX)
Enzymes [BR:
pfl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PFL_2882 (glgX)
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GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
baeRF_family7
Motif
Other DBs
NCBI-ProteinID:
AAY92154
UniProt:
Q4KCP5
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Position
complement(3222154..3224313)
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AA seq
719 aa
AA seq
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MSRSKQPAATPESEPSRIREGLPFPLGATWDGLGVNFALFSANATKVELCVFDDAGEVEL
ERIELPEYTDEIFHGYLPDAHPGLIYGYRVHGPYDPANGHRFNPNKLLIDPYAKQLVGEL
KWSEALFGYTIGHPDADLSFDERDSAPFVPKCKVIDPAHTWGNDQRVSVPWDKTIIYETH
VRGFTMRHPSVPENLRGSFAGLMVDDVLEHIRKLGVSSVELLPIHAFVNDQHLLHKGMTN
YWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHEAGLEVILDVVYNHTAEGNEQGPTLSM
RGIDNASYYRLMPDDKRFYINDSGTGNTLDLSHPCVLQMVTDSLRYWATEMHVDGFRFDL
ATILGRYHDGFDERHSFLVACRQDPVLRQVKMIAEPWDCGPGGYQVGNFPPGWVEWNDRF
RDTVRAFWKGDDGQLADFAGRMTASGEMFNQRGRRPYASVNFVTAHDGFTLHDLVSYNDK
HNEANDENNQDGSNNNLSWNHGVEGPSDDPEINALRLRQMRNFFATLLLAQGTPMVVAGD
EFARTQHGNNNAYCQDSEIGWVNWELDNDGKSLLKFVKRLIKLRLSYPILRRGRFLVGSY
NEDIGVKDVTWLAPDGSEMTTEHWQDPHGRCLGMLLDGRAQETGIRRPGADATLLLVVNA
HHDIVNFRLPEVPAGEFWTCMLDTNQPAVRGQERFAFGHEYSVTGRSLLLFELQHEEED
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagcagatccaagcagcccgccgccactcccgagagcgaaccctcgcgcattcgtgaa
ggcctgcccttccccctcggcgccacctgggacggcctgggggtcaacttcgcgctgttc
tcggccaatgccaccaaggtcgaactctgtgtgttcgatgatgccggcgaagtggaactc
gaacgcatcgaacttccggaatacaccgacgaaatcttccacggctacctgcccgacgct
cacccggggctgatctacggctaccgcgtgcacggcccctacgacccggccaacggtcac
cgtttcaaccccaacaaactgctgatcgacccctatgccaagcaactggtgggcgagctg
aaatggtccgaggcgctgttcggctacaccatcggccacccggatgccgacctcagtttc
gacgagcgcgacagcgcgcccttcgtgcccaagtgcaaggtcatcgacccggcccacacc
tggggcaacgaccagcgggtcagcgtgccctgggacaagaccatcatctacgagacccat
gtgcgcggcttcaccatgcgccacccttcggtgcccgagaacctgcggggcagcttcgcc
gggctgatggtggacgacgtgctggagcacatccgcaagctcggggtgtcgtcggtggag
ctgctgccgatccacgccttcgtcaacgaccagcacctgctgcacaagggcatgaccaac
tactggggctacaacagcatcgctttcttcgcccccgacccgcgctacctggccagcggc
aagatcgccgaattcaaggaaatggtcgcccacctgcacgaagccgggctggaggtgatc
ctggatgtggtctacaaccacaccgccgaaggcaacgagcaaggcccgaccctgtccatg
cgcggcatcgacaacgcctcctactaccgcctgatgcctgacgacaagcgcttctacatc
aacgattcgggcaccggcaacaccctggacctgagccacccctgcgtgttgcagatggtc
accgactccctgcgctactgggccacggaaatgcacgtggatggcttccgcttcgacctg
gcgaccattctcgggcgttaccacgacggtttcgacgagcgccacagcttcctcgtggcc
tgccgccaggacccggtgctgcgccaggtgaagatgatcgccgaaccctgggactgcggc
cccggcggctatcaggtgggcaacttcccgccgggctgggtggaatggaacgatcgcttt
cgcgacaccgtgcgggccttctggaagggcgatgacggccagctggcggattttgccggg
cgcatgaccgcctccggcgagatgttcaaccagcgcggccgccggccctacgcctcggtc
aacttcgtcactgcccacgacggtttcaccctgcacgacctggtatcctacaacgacaag
cacaacgaagccaacgacgagaacaaccaggacggcagcaacaacaacctgtcctggaac
cacggcgtcgaaggccccagcgacgaccccgagatcaacgccctgcgcctgcgccagatg
cgcaacttcttcgccaccctgctactggcccagggcacgccgatggtggtggccggcgac
gaattcgcccgcacccagcacggcaacaacaacgcctactgccaggacagcgagatcggc
tgggtcaactgggagctggataacgacggcaagtccctgctcaagttcgtcaagcgcctg
atcaagctgcgcctgagctacccgatcctgcggcgcgggcgcttcctggtgggcagctac
aacgaggacatcggggtcaaggacgtcacctggctggctcccgacggcagcgagatgacc
accgagcactggcaggacccccatggtcgctgcctgggcatgctgctggacggccgcgcc
caggaaaccgggatccgtcgccccggggccgacgccaccctgctgctggtggtcaacgcc
caccacgacatcgtcaacttccgcctgcctgaggtgcccgccggggagttctggacctgc
atgctcgacaccaaccagccggcggtgcgcggccaggaacgctttgccttcggccacgag
tattcggtgaccgggcgctccctgctgctgttcgaactgcaacatgaggaagaagactga
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