Pseudomonas protegens Pf-5: PFL_2943
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Entry
PFL_2943 CDS
T00249
Symbol
fadD_1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00061
Fatty acid biosynthesis
pfl00071
Fatty acid degradation
pfl01100
Metabolic pathways
pfl01212
Fatty acid metabolism
pfl02024
Quorum sensing
pfl04146
Peroxisome
Module
pfl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PFL_2943 (fadD_1)
00071 Fatty acid degradation
PFL_2943 (fadD_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFL_2943 (fadD_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFL_2943 (fadD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfl01004
]
PFL_2943 (fadD_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfl04147
]
PFL_2943 (fadD_1)
Enzymes [BR:
pfl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PFL_2943 (fadD_1)
Lipid biosynthesis proteins [BR:
pfl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PFL_2943 (fadD_1)
Exosome [BR:
pfl04147
]
Exosomal proteins
Exosomal proteins of breast milk
PFL_2943 (fadD_1)
Exosomal proteins of breast cancer cells
PFL_2943 (fadD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AAY92215
UniProt:
Q4KCI4
LinkDB
All DBs
Position
3294557..3296260
Genome browser
AA seq
567 aa
AA seq
DB search
MSVVSLQPVERIWLNAYLPGVPSDIEAEIDRYPSLREVFLEHVDKYRQRVAYVSIGTEMG
YDLWEKRVFAFAAWLQSKGVKKGDRVALMMPNCLQYPICLFGTLLVGAVVVNVNPLYTAH
ELRHLLKDSGAETVVIFENFAHTLEQAMPGSQLKNIVVAAIGDLLGTFKGAALNFALRHV
QKQVPKFNLPGAIRFPAMMKLASVLEHRPVELKQDDIAFLQYTGGTTGDAKGAMLTHRNI
LANLMQAKAWVGDQLDENQQETNVTLLPLYHVLSLTVNCLMFMCLGGRNILIANPRDVKR
VQMILRKEKFSGIVGVNTLFNGLLENEEFRGRDFSDLKLAIAGGMATHTSVARRWKEVTG
VPIIEGYGLTECSPVVSISPIDIARMREGDFTGTIGVPLPSTWVRFVREDGQLAELGEEG
ELQVRGPQVMKGYWQRPEETAKVLDRHGWLSTGDVGVMNEQGFIRLVDRKKDMILVSGFN
VYPNEIEDAVALHPGVAEVAAIGVEDDVTGEKVKIFVVRKDPALTQDQLLAHCREYLTGY
KVPRYVEFRTQELPKTTVGKVLRRALR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgtgagcctgcaacccgtcgagcgtatctggctgaacgcttacctgccggga
gtgcccagcgatatcgaagccgagatcgaccgttacccgtcgctgcgggaagtgttcctc
gaacacgtggacaagtatcgccaacgggtggcctatgtgagcatcggcaccgagatgggc
tacgacctgtgggagaagcgggtattcgctttcgccgcctggttgcagtccaagggagtg
aagaagggcgaccgggtggcgttgatgatgcccaactgcctgcagtacccgatctgcctg
ttcggcaccctgctggtgggggccgtggtggtcaacgtcaacccgctgtacacggcgcac
gaactgcggcacctgctcaaggacagcggcgccgagaccgtggtgatcttcgagaatttc
gcccacaccctggaacaggcgatgccgggcagccaattgaagaacatcgtggtggccgcc
atcggtgacctgctgggcaccttcaagggcgcagccctgaacttcgccttgcgccatgtg
caaaagcaggtgccgaaattcaacctgccgggggccatccgctttccggcgatgatgaag
ctggccagcgtgctggagcaccgcccggtggaactcaagcaggacgacatcgccttcctg
caatacaccggcggcaccacgggcgatgccaagggcgccatgctcacgcaccgcaacatc
ctcgccaacctgatgcaggccaaggcctgggtcggtgaccagctggacgagaaccagcag
gaaaccaacgtcaccctgttgccgctgtaccacgtgctgtcgctgacggtgaactgcctg
atgttcatgtgcctgggcgggcgcaacatcctgatcgccaacccgcgtgatgtgaagcgg
gtgcagatgatcctgcgcaaggaaaagttcagcggcatcgtcggggtcaacaccctgttc
aacggcctgctggagaacgaagagtttcgcggccgggatttctccgacctgaagttggcg
attgcgggcggcatggccacccacacctcggtggcccggcgctggaaggaagtcaccggg
gtgccgatcatcgaaggctacggcctgaccgagtgctcaccggtggtgagcatcagcccg
atcgatattgcgcgcatgcgcgaaggcgatttcaccgggaccatcggcgtaccgctgcct
tcgacctgggtgcgcttcgtgcgcgaggacggccaactggccgagctgggcgaggagggc
gagctgcaggtacgcgggccgcaggtgatgaagggctactggcagcgcccggaggaaacc
gccaaggttctggaccgccacggctggctgtccaccggggatgtcggggtgatgaacgag
cagggcttcattcgcctggtggaccgcaagaaggacatgatcctggtctccggtttcaac
gtgtaccccaacgagatcgaagatgcggtggccctgcaccccggggtggcggaagtggcg
gcgattggcgtcgaggatgatgtgaccggcgagaaagtgaagatcttcgtcgtgcgcaag
gacccggcgctgacccaggaccagttgctggcccactgccgggaatacctcaccggctac
aaagtgccgcgctatgtagagttccgtacccaagagctgcccaagaccaccgtgggcaaa
gtcctgcgccgcgccctgcgctga
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