Pseudomonas protegens Pf-5: PFL_2982
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Entry
PFL_2982 CDS
T00249
Symbol
fitC
Name
(GenBank) type I secretion system ATPase FitC
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFL_2982 (fitC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfl02000
]
PFL_2982 (fitC)
02044 Secretion system [BR:
pfl02044
]
PFL_2982 (fitC)
Transporters [BR:
pfl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PFL_2982 (fitC)
Secretion system [BR:
pfl02044
]
Type I secretion system
RTX toxin transporter
PFL_2982 (fitC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_22
AAA_16
AAA_21
AAA_29
AAA_18
MeaB
SbcC_Walker_B
Tmemb_9
ABC_ATPase
AAA_28
Rad17
Transcript_VP30
CoaE
PRK
nSTAND3
NB-ARC
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AAY92254
UniProt:
Q4KCE5
LinkDB
All DBs
Position
3348465..3350624
Genome browser
AA seq
719 aa
AA seq
DB search
MTRAFDAASEPSPTMLDTGLHALAWAARRFDLSISVAQLTHRLGRVEGPADSLDLRRCAG
WIGLRARAVQSRVQRLHHLPLPALLDTTRGWAVLDAVEGDRVRVFWPLQGQCQTLSRQEL
ATLWQGHDQGQGEVLLLAERHVQLKTGGFGVSWFLPSILKHGRQFRSVLLVSLMLQGVAL
VTPLLFENIIDRVLVSRGLSSLQVLGIAMLALALFEPLFGLLRSWLFSNVASKINAELSA
RLYQHLIQLPLGYFQRRQSGEIIARVGEMQQIRQFLTGSALTLVLDLAFCGLFIAVMYSY
APLLTWVVVGSLALYFLFWLCVGPLLRSRALREYELNAANTAFLTETVTGIETIKTGAIE
SAFQQQWQRQLAAYVRAAFHTRIVGIWAGQGIGLIQKLTAALLLWWGVMLVLDGQLSPGQ
LVAFNMLAGHVVEPILRLAQVWQDFQHTLISLRRLGDILDSDCESGSGGLASVPALQGGV
SFQGVRFRYEEDGQEVLRQLDLEIQPGEFVGITGPSGSGKSTLTRLLQRLYVPQHGRVLV
DGIDLAIADPVALRRNMSVVLQESVLFAGSVAENIRLCRPQASDAEVRHAAGLAGAASFI
EALAQGYETEVGERGGQLSGGQRQRIALARALLTNPGILLLDEATSALDYESEAAVMANL
QGIVHGRTVISVAHRLNTLRHADRILVIDQGRVLEQGTHQQLLALDGLYARQWALQMKD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgctttcgatgccgcttctgaaccctcaccgacaatgctcgacaccggcctg
cacgccctagcctgggccgcccggcgctttgacctgagcatcagcgtggcgcaactgact
caccgcctgggacgggttgaaggtccggccgacagccttgacctgcggcgctgcgccggc
tggatcggcctgcgcgcacgggcagtgcaaagccgggtgcaacgcttgcatcacctgccg
ctgccggcgttgctggacaccacgcggggctgggcggtgctggacgcggtggagggcgac
cgggtccgggtgttctggccgctgcaggggcaatgccagaccctgtcgcgccaggagctg
gcgacgctctggcaaggccatgatcagggacagggagaggtgttgctgctggccgagcgg
catgtgcagctgaagacgggtggtttcggcgtctcctggttcctgccgtcgatcctcaag
catgggcgccagtttcgcagcgtgctgctggtgtcgctgatgctgcaaggcgtagcgctg
gtcacgccgctgctgttcgagaacatcatcgaccgggttctggtcagtcgcggcctgtcg
agcctgcaagtgctggggatcgccatgctggccctggcgctgttcgagcccttgttcggc
ctgttgcggtcctggctgttcagcaatgtggcgagcaagatcaacgccgagctgtccgcg
cgcctgtaccagcatctgatccagttgccgctgggttatttccagcggcgccagagcggc
gagatcatcgcccgggtcggtgagatgcaacagatccgccagtttcttaccggctcggcc
ttgaccctggtgctggacctggcgttctgcgggttgttcatcgccgtgatgtacagctac
gcaccgctgctgacctgggtggttgtgggctccctggccctgtatttcctcttctggctg
tgcgtgggccccttgctgcgcagccgggccttgcgcgaatacgagttgaatgcggccaac
acggcgtttctcaccgagaccgtgaccggcatcgagactatcaagaccggggccatcgaa
agcgccttccagcagcagtggcagcgccagctggcggcttatgtgcgtgcggcgttccac
acccgcatcgtcgggatctgggccgggcagggcatcggcctgatccagaagctgaccgct
gcgctgttgctgtggtggggcgtgatgctggtgctggatggccagttgagccccggccaa
ctggtggccttcaacatgctggccgggcatgtggtggagccgatcctgcgtctggcccag
gtctggcaggacttccagcacacgctgatttccctgcgccgcctgggggacattctcgac
agcgactgtgaaagcggcagcggtggcctggcctcggtgccagcgttgcagggcggggtg
agcttccagggggtgcgttttcgctacgaggaagacggccaggaggtgctgcgccagctg
gatctggagatccagccgggcgagttcgtcggcatcaccgggccttccggttccggcaaa
tcgaccctgacccgcctgctgcagcgcctctatgtgccccagcacggccgggtgctggtg
gacggcatcgacctggccatcgccgatccggtggccctgcgccgcaacatgagcgtggtg
ctccaggaaagcgtgttgttcgccggcagcgttgccgagaacatccgcctgtgccggcct
caagccagcgacgccgaggtgcggcacgccgccggtctggccggggcggcgtcctttatc
gaggccctggcccagggctacgagaccgaggtgggcgagcgtggcggccagctctccggc
ggccagcgtcaacgcattgccctggcccgggccctgttgaccaaccccggcatcctgttg
ctggacgaagccaccagtgccctggactacgagtcggaagcggcggtgatggccaacctg
cagggcatcgtccacggccgcacggtgatcagcgtcgcccatcgcctcaataccctgcgc
catgcggaccggattctggtcatcgatcagggccgggtgctcgaacaaggcacacaccaa
cagctgctcgctctggacgggttgtatgcccggcagtgggcgctgcagatgaaggactga
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