Pseudomonas protegens Pf-5: PFL_3294
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Entry
PFL_3294 CDS
T00249
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl03030
DNA replication
pfl03430
Mismatch repair
pfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFL_3294 (dnaQ)
03430 Mismatch repair
PFL_3294 (dnaQ)
03440 Homologous recombination
PFL_3294 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfl03032
]
PFL_3294 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pfl03400
]
PFL_3294 (dnaQ)
Enzymes [BR:
pfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFL_3294 (dnaQ)
DNA replication proteins [BR:
pfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFL_3294 (dnaQ)
DNA repair and recombination proteins [BR:
pfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFL_3294 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AAY92563
UniProt:
Q4KBI4
LinkDB
All DBs
Position
complement(3802474..3803223)
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AA seq
249 aa
AA seq
DB search
MANRSVVLDTETTGMPVTDGHRIIEIGCVELIGRRLTGRHFHVYLQPDRESDEGAIGVHG
ITNEFLVGKPRFAEVADEFFDFIQGAQLIIHNAAFDVGFINNEFALMGQHERADITQHCT
ILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGGQTSLS
LAGNASDGNGSGEGAGQASEIRRLPADRPRGRIIQASDAELAEHQVRLEIIAKSAGAPAL
WTQLLETQQ
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggccaacagatctgttgtactcgataccgaaaccaccggcatgccggtgaccgacggc
caccggatcattgaaatcggttgcgtcgagttgatcggtcggcgcctgaccggccggcac
ttccacgtttacctgcaaccggatcgcgagagcgatgagggcgccatcggcgtccacggc
atcaccaacgaattcctggtgggcaagccgcgtttcgccgaagtcgccgacgagttcttc
gacttcatccagggcgcgcagctgatcatccacaacgcggcgttcgacgttggcttcatc
aacaacgaattcgccttgatgggccagcacgaacgggccgacatcacccagcactgcacc
atcctcgacaccctgatgatggcccgcgagcggcacccggggcagcgcaacagcctcgac
gccctgtgcaaacgctacggcgtcgacaactccggccgtgaactgcacggcgccttgctc
gactcggagatcctggccgacgtctacctgaccatgaccggtggccagaccagcctgtcc
ctggcgggcaatgcctcggacggcaacggctctggcgagggggccggccaggcttcggaa
atccgccgcttgccggccgatcgcccgcgcgggcggatcatccaggccagcgacgccgaa
ctggccgagcaccaggtgcgcctggaaatcatcgccaagtccgccggtgccccggcgctc
tggacccagttgctcgaaacccagcagtaa
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