Pseudomonas protegens Pf-5: PFL_3322
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Entry
PFL_3322 CDS
T00249
Name
(GenBank) ribonuclease T2 family protein
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfl03016
]
PFL_3322
Enzymes [BR:
pfl01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
PFL_3322
Transfer RNA biogenesis [BR:
pfl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PFL_3322
Prokaryotic type
PFL_3322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
AAY92591
UniProt:
Q4KBF6
LinkDB
All DBs
Position
complement(3835691..3836347)
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AA seq
218 aa
AA seq
DB search
MRKFFTLMAALVLTLGMVGISDARQPKQQRDSVAGTFDYYLLTLSWSPTFCLMHPENEQC
TGKGYGFVLHGLWPQYAKGGWPESCPPLTQLNAQERAKGLTLFPTAKLMNHEWSKHGTCS
GLGAMGYLDAADKALARVQIPEALQPSTTVRYFEASQIAQQFRQSNPGIAENGIAILCSG
PELSEVRVCLTKDLEFGACGKGVKNQCRAGQIRIPPIR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagttttttaccctgatggcagccctggtgctgaccctggggatggtgggcatc
agcgacgcacgtcagcccaagcagcagcgcgattcggtggcgggtaccttcgactactac
ctgctgaccctgtcctggtcgccgaccttctgcctgatgcacccggaaaacgagcagtgc
accggcaagggctacggttttgtcctgcacggcctgtggccgcaatacgccaagggtggc
tggcccgagtcctgcccacccctgacccagctcaatgcccaggagcgggccaagggcctg
accctgtttcccaccgccaagctgatgaaccatgaatggagcaagcacggcacctgcagc
ggcctgggggccatggggtacctggatgccgcggacaaggccctggccagggtacagatt
cccgaggcgctgcagccttcgaccacggtgcgctatttcgaggccagccagattgcccag
cagtttcgccagagcaacccggggatcgccgagaacggcatcgccattctgtgcagcggc
cccgagctgtccgaagttcgtgtttgcctgaccaaggacctggagttcggcgcctgcggc
aaaggcgtgaagaaccagtgccgtgccgggcagatccgcattccgcccatccgctga
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