Pseudomonas protegens Pf-5: PFL_3876
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Entry
PFL_3876 CDS
T00249
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFL_3876 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfl01007
]
PFL_3876 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfl03016
]
PFL_3876 (serS)
Enzymes [BR:
pfl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PFL_3876 (serS)
Amino acid related enzymes [BR:
pfl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PFL_3876 (serS)
Transfer RNA biogenesis [BR:
pfl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PFL_3876 (serS)
Prokaryotic type
PFL_3876 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Filament
CEP162_C
FapA
SPC25_N
FlgN
TerB_C
DUF5788
FmiP_Thoc5
Motif
Other DBs
NCBI-ProteinID:
AAY93140
UniProt:
Q4K9V7
LinkDB
All DBs
Position
complement(4473766..4475046)
Genome browser
AA seq
426 aa
AA seq
DB search
MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEQLQAERNARSKSIGQ
AKQRGEDIAPLMADVERMGNELSSGKAELENIQSELDSILFGIPNLPHESVPVGEDEDGN
VEVRRWGTPTAFDFPIKDHVALGETHGWLDFETAAKLSGARFALLRGPIARLHRALAQFM
INLHTGEHGYEEAYTPYLVQAPALVGTSQLPKFEEDLFKITREGEADLYLIPTAEVSLTN
IVAGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQVVEPSTSMEA
LEGLTANAEKVLQLLQLPYRVLALCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNCGD
FQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPDVLKPYMG
GLEVIG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctcgattccaaactgttacgtagcaacctccaggacgtagcggatcgtctggcatcc
cgcggctttgccctggatgtggcacgcatcgaagcgctggaagaacagcgcaagaccgtg
cagacccgcaccgagcaactgcaggctgaacgtaacgcgcgctccaagtccatcggccag
gccaagcaacgcggcgaagacatcgccccgctgatggccgacgttgagcgcatggggaac
gagctgagctccggcaaggcggagctggaaaacatccagagcgaactggattcgatcctg
ttcggcattcccaacctgccccacgagtcggtgccggtgggcgaagatgaagacggcaac
gttgaagtgcgccgctggggcaccccgaccgccttcgatttcccgatcaaggaccacgtg
gccctgggcgaaacccacggctggctggactttgaaaccgccgccaagctgtccggcgcg
cgttttgccctgttgcgcggcccgatcgcccgtctgcaccgcgccctggcgcagttcatg
atcaacctgcacaccggcgagcacggctacgaagaggcctacaccccgtacctggtgcag
gcgccggccctggtgggtaccagccagctgccgaagttcgaggaagacctgttcaagatc
actcgcgaaggcgaagccgatctgtacctgatcccgaccgccgaagtgtccctgaccaac
atcgtcgctggcgagattctcgacgccaagcaactgccgctgaagttcgtcgcccatacg
ccgtgcttccgtagtgaagccggtgcttcgggtcgcgatacccgcggcatgatccgccag
caccagttcgacaaggtcgagatggtccaggtggtcgagccgtcgacctccatggaagcc
ctggaaggcctgaccgccaacgccgagaaagtcctgcaactgctgcaactgccgtaccgc
gtactggccctgtgcaccggcgacatgggcttcagtgcggtcaagacctacgacctggaa
gtctgggtaccgagccaggacaagtaccgcgagatctcctcgtgctccaactgtggcgat
ttccaggcccgccgcatgcaggcgcgcttccgcaacccggaaaccggcaagccggagctg
gtgcacaccctcaacggttccggcctggccgtgggccgcaccctggtggcggtgctggag
aactaccagcaggccgacggttcgatccgtgtgccggatgtgctgaagccgtacatgggt
ggccttgaggtcatcggctaa
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