Pseudomonas protegens Pf-5: PFL_3888
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Entry
PFL_3888 CDS
T00249
Symbol
icd_1
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00020
Citrate cycle (TCA cycle)
pfl00480
Glutathione metabolism
pfl00720
Other carbon fixation pathways
pfl01100
Metabolic pathways
pfl01110
Biosynthesis of secondary metabolites
pfl01120
Microbial metabolism in diverse environments
pfl01200
Carbon metabolism
pfl01210
2-Oxocarboxylic acid metabolism
pfl01230
Biosynthesis of amino acids
pfl04146
Peroxisome
Module
pfl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfl_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PFL_3888 (icd_1)
09102 Energy metabolism
00720 Other carbon fixation pathways
PFL_3888 (icd_1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PFL_3888 (icd_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFL_3888 (icd_1)
Enzymes [BR:
pfl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PFL_3888 (icd_1)
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GFIT
Motif
Pfam:
Iso_dh
SHOCT_2
Motif
Other DBs
NCBI-ProteinID:
AAY93152
UniProt:
Q4K9U5
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Position
complement(4486328..4487584)
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AA seq
418 aa
AA seq
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MGYKKIQVPAVGDKITVNADHSLNVPNNPIIPFIEGDGIGVDISPVMIKVVDAAVKKAYG
GERKISWMEVYAGEKATQVYDQDTWLPQETLDAVKDYVVSIKGPLTTPVGGGIRSLNVAL
RQQLDLYVCLRPVRWFEGVPSPVKKPGDVDMTIFRENSEDIYAGIEWKAGSAEATKVIKF
LKEEMGVTKIRFDENCGIGVKPVSLQGTKRLARKALQYVVDNDRDSLTIVHKGNIMKFTE
GAFKEWAYEVAAEEFGATLLDGGPWMQFKNPKTGKNVIVKDAIADAMLQQILLRPAEYDV
IATLNLNGDYLSDALAAEVGGIGIAPGANLSDTVAMFEATHGTAPKYAGKDQVNPGSLIL
SAEMMLRHMGWTEAADLIIKGTNGAISAKTVTYDFERLMDGATLLSSSAFGDALISHM
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggatacaagaagattcaggttccagcagtcggcgacaaaatcaccgtcaacgcagac
cattctctcaatgttcctaacaacccgattattcctttcatcgaaggcgacggtattggt
gttgatatcagcccggtcatgatcaaggttgtcgatgctgcggttaagaaggcttacggc
ggcgaacgcaagatttcctggatggaagtgtatgccggggaaaaagcgactcaagtgtac
gaccaggacacctggcttcctcaggaaaccctggacgcagtgaaggattacgtggtttcc
atcaagggcccgctgaccactccggtcggtggtggcatccgttccctgaacgtggccctg
cgtcagcaactcgatctttatgtatgcctgcgccctgtgcgctggttcgaaggcgtgccc
agcccggtgaaaaagccgggtgacgtggacatgaccatcttccgtgaaaactccgaagac
atttacgccggcatcgagtggaaagccggctcggcagaagccaccaaggtcatcaagttc
ctcaaggaggaaatgggtgtcaccaagatccgtttcgacgaaaactgcggcatcggcgtc
aagccggtttccctgcagggcaccaagcgtctggcgcgcaaggcgctgcaatatgtagtg
gataacgaccgcgactcgctgaccatcgtgcacaaaggcaacatcatgaagttcaccgaa
ggtgccttcaaggaatgggcctacgaagtggcggccgaagagttcggcgcgaccctgctg
gacggcggtccctggatgcagttcaagaacccgaaaaccggcaagaacgtcatcgtcaag
gatgccatcgccgacgccatgctccagcagatcctgctgcgcccggccgaatacgatgtg
atcgcgaccctcaacctcaacggtgactacctgtccgacgccctggcggcggaagtgggc
ggcatcggcattgcgccaggcgccaacctgtccgataccgtggccatgttcgaagccacc
cacggtaccgcgcccaagtatgccggcaaggaccaggtcaacccgggttcgctgatcctc
tccgcagagatgatgctgcgccacatgggctggaccgaagcggccgacctgatcatcaag
ggtaccaatggcgcaatctcggccaagaccgtgacctatgacttcgaacgcctgatggac
ggtgcaaccctgctgtcttcctcggccttcggcgatgcgctgatctcgcacatgtaa
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