Pseudomonas protegens Pf-5: PFL_3889
Help
Entry
PFL_3889 CDS
T00249
Symbol
icd_2
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00020
Citrate cycle (TCA cycle)
pfl00480
Glutathione metabolism
pfl00720
Other carbon fixation pathways
pfl01100
Metabolic pathways
pfl01110
Biosynthesis of secondary metabolites
pfl01120
Microbial metabolism in diverse environments
pfl01200
Carbon metabolism
pfl01210
2-Oxocarboxylic acid metabolism
pfl01230
Biosynthesis of amino acids
pfl04146
Peroxisome
Module
pfl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfl_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PFL_3889 (icd_2)
09102 Energy metabolism
00720 Other carbon fixation pathways
PFL_3889 (icd_2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PFL_3889 (icd_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFL_3889 (icd_2)
Enzymes [BR:
pfl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PFL_3889 (icd_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AAY93153
UniProt:
Q4K9U4
LinkDB
All DBs
Position
4488090..4490315
Genome browser
AA seq
741 aa
AA seq
DB search
MPTRSKIIYTFTDEAPALATYSLLPIVEAFTASADIAVETRDISLAGRILASFPEQLGTK
AVPDHLAELGELAVTPEANIIKLPNISASVPQLQAAIKELQAQGYALPDYPETVTCDADK
DAKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAKDSKSHVAHMSNGD
FYGSEKAALIEAADSVKIELIAQDGTATVLKEKTAVQAGEILDCAVMSKKALRAFIAAEI
EDAKKQGVLLSVHLKATMMKVSDPIMFGQIVAEFYQDALSKHTTVLQEIGFNLNNGIGDL
YARIKALPADQQAAIEADIQAVYAARPALAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWGTDGQLHDTKAVIPDRCYATIYQAVIEDCKANGAFDPTTMGSVPNVGLMAKKAEEY
GSHDKTFEIKADGVVRVTDSKGSLLLEQKVEAGDIFRMCQTKDAPIQDWVKLAVNRARAS
STPAIFWLDPMRAHDGVMIEKVQAYLKDHDTSDLDIRIMSPVEAMKFTLARTRDGKDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLLEENFLR
WDSLGEFLALAASLEHLGNTYNNPKALVLAKTLDQATGQFLDNNKSPSRKVGNIDNRGSH
FYLALYWAQALAAQTEDAVLQAQFSTLAKTLTENEATIVAELNAVQGKPVDIGGYYSANP
ELVSQAMRPSATLNAAIAALV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgctcgaagatcatctacaccttcaccgacgaagccccggccctcgccacc
tattccctgctgcctatcgtagaagccttcaccgcttcggctgatatcgccgtggaaacc
cgcgacatctccctggccggccgcatcctcgccagcttccctgagcagttgggtaccaaa
gcggtgccggaccaccttgccgaactgggcgagctggcggtcaccccagaagccaacatc
atcaagctgccgaacatcagcgcctcggtaccgcaactgcaagccgcgatcaaagagctg
caggcccagggctatgccctgccggactatcccgagaccgtgacctgcgacgccgacaaa
gacgccaaggcccgttacgacaaggtcaagggcagcgccgtgaacccggtcctgcgtgaa
ggcaactccgaccgccgcgctccgctgtcggtgaagaactatgcgcgcaagcacccgcac
aagatgggcgcctgggccaaggactccaagtcccacgtcgcccacatgagcaacggcgac
ttctacggcagcgaaaaagcggccctgatcgaagcagccgacagcgtcaagatcgaactg
atcgcccaggacggcactgccaccgtcctgaaggaaaagaccgccgtgcaagccggcgag
atcctcgactgcgccgtaatgagcaaaaaggccctgcgcgccttcatcgccgctgaaatc
gaagacgccaagaagcaaggcgtactgctttcggtacacctcaaggccaccatgatgaag
gtctccgacccgatcatgttcggccagatcgttgccgagttctatcaggatgccctgagc
aagcacaccaccgtgctgcaggaaatcggcttcaacctgaacaacggcatcggcgacctg
tacgcccgcatcaaggcgttgcctgccgatcagcaagccgccatcgaagccgacatccag
gccgtctacgcagcccgccctgccctggccatggtcaactccgacaaaggcatcaccaac
ctgcacgtgccgagcgacgtgatcgtcgacgcctcgatgcctgccatgatccgtgactcc
ggcaagatgtggggcaccgacggccagctgcacgacaccaaggccgtgatcccggaccgt
tgctacgccaccatctaccaggccgtgatcgaagactgcaaagccaatggcgcgttcgat
ccgaccaccatgggcagcgtgccgaacgttggcctgatggcgaaaaaagccgaagaatac
ggttcccacgacaagactttcgaaatcaaggctgacggcgtggttcgcgtcaccgacagc
aaaggcagcctgctgctggagcagaaagtcgaagccggcgatatcttccgcatgtgccag
accaaagacgcgccgatccaggactgggtcaaactggcggtcaaccgtgctcgtgccagc
agcaccccggccattttctggctggacccgatgcgtgcccacgacggtgtgatgatcgag
aaagttcaggcctacctgaaggatcacgacaccagcgacctggacatccgcatcatgtcc
ccggttgaagccatgaagttcaccctggcccgcacccgcgacggcaaggacaccatctcg
gtgaccggcaacgtactgcgcgactacctgaccgacctgttcccgatcatggaactgggc
accagcgccaagatgctgtcgatcgtgccgctgatgaacggtggcggcctgttcgaaacc
ggcgccggcggttcggctcccaaacacgtacagcagctgctggaagagaacttcctgcgc
tgggactccctgggtgagttcctggccctggcagcctccctggagcacctgggcaacacc
tacaacaacccgaaagccctggtgctcgccaagaccctggaccaggcgaccggccagttc
ctcgacaacaacaagtcgccatcgcgcaaggtcggcaacatcgacaaccgcggcagccac
ttctacctggcgctgtactgggctcaagccctggccgcccagaccgaggacgctgtcctg
caagcgcagttcagcaccctggccaagaccctgaccgagaacgaagcgaccatcgtcgcc
gagctcaacgccgtacagggcaagcccgtggacatcggtggctactacagcgccaacccc
gagctggtgagccaggccatgcgcccgagcgccaccctcaacgcagccatcgctgcgctg
gtgtaa
DBGET
integrated database retrieval system
