Pseudomonas protegens Pf-5: PFL_3934
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Entry
PFL_3934 CDS
T00249
Symbol
liuE
Name
(GenBank) hydroxymethylglutaryl-CoA lyase LiuE
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00280
Valine, leucine and isoleucine degradation
pfl00650
Butanoate metabolism
pfl00907
Pinene, camphor and geraniol degradation
pfl01100
Metabolic pathways
pfl01120
Microbial metabolism in diverse environments
pfl04146
Peroxisome
Module
pfl_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PFL_3934 (liuE)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PFL_3934 (liuE)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PFL_3934 (liuE)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFL_3934 (liuE)
Enzymes [BR:
pfl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
PFL_3934 (liuE)
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GFIT
Motif
Pfam:
HMGL-like
HypF_C_2
DUF732
Motif
Other DBs
NCBI-ProteinID:
AAY93198
UniProt:
Q4K9P9
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All DBs
Position
4545135..4546034
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AA seq
299 aa
AA seq
DB search
MSLPSHVRLIEVGPRDGLQNEAQPISVEDKVQLVDALAAAGLGYIEVGSFVSPKWVPQMA
GSAEVFARIQRKPGVVYGALAPNLRGFEDALAAGVKEVAVFAAASQAFSQRNINCSISES
LERFVPIMDAAKQHGISVRGYVSCVLGCPYEGEVAPEQVAMVARELHDMGCYEVSLGDTI
GTGTAGATRRMFEVVGAQVPREKLAGHFHDTYGQALANVYASLLEGIAVFDSSIAGLGGC
PYAKGASGNVATEDVLYLLNGLGIHTGIDMDRLIDAGRQICNVLGRPSGSRVAKARNAS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccccagccatgtacgcctgatcgaagtcggcccccgcgacggcctgcagaac
gaagcccagcccatcagcgtcgaagacaaggtgcaattggtggatgccctcgccgccgcc
ggcctgggctacatagaagtcggcagtttcgtgtctcccaaatgggtgccgcagatggcc
ggttcagccgaggtcttcgcccgtatccagcgcaagcccggggttgtctatggcgcactg
gcgcccaacctgcgggggttcgaagatgccctggcggctggggtcaaggaagtggcggtg
ttcgccgcggcctcgcaagccttctcccagcgcaacatcaactgctccatcagcgaaagc
ctggaacgcttcgtgccgatcatggacgccgccaagcagcacggcatcagcgtgcgcggt
tacgtgtcgtgcgtgctgggctgcccttatgaaggtgaagtggccccggaacaggtggcc
atggtcgcccgcgaactgcatgacatgggctgttacgaggtctctctgggcgacaccatt
ggtaccggcaccgccggtgccacccggcgcatgttcgaggtggtgggcgcccaggtacca
cgggaaaaactcgccgggcactttcacgacacctacggccaggccctggccaatgtctac
gccagcctgctggaaggcatcgcggtgttcgacagctccatcgccggcctcggcggctgc
ccctatgccaagggcgccagcggaaacgtcgccaccgaagacgtgctctacctgctcaat
ggcctgggcatccataccggtatcgacatggaccgcctgatcgacgccggccggcagatc
tgcaacgtgctggggcgcccctccggctcccgcgtggccaaggcgcgtaacgccagctga
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