Pseudomonas protegens Pf-5: PFL_4027
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Entry
PFL_4027 CDS
T00249
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFL_4027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfl02000
]
PFL_4027
Transporters [BR:
pfl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PFL_4027
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_16
AAA_22
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AAY93288
UniProt:
Q4K9F9
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All DBs
Position
4643778..4644773
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AA seq
331 aa
AA seq
DB search
MTMSSSAVLNIDNLSLEFPAYRSNVQALNGVSLHVNPGEIVGVVGESGSGKSVTAMLSLR
LLPERSYRITSGSLSLLGRDMLATPEKQLLQIRGRDAAMIFQEPMTALNPTRRIGRQMLD
VIIHHQRLSQEQARAKAIDLLRDMHIADPEQVLQAYPFELSGGMRQRVMIALAFSCDPQL
LIADEPTTALDVTVQRQVLLLLREKARQRGTAILLITHDMAVVSQFCDRVYVMYTGAVVE
QGSTAQVMLDPQHPYTRGLLSGLPEQVRPGEPLLTIPGQVPNLAHLPGGCTFRERCSQAM
AVCAQRPPLHSINASQQHKSACWLAAPESAQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgagctcatccgccgttctcaacatcgacaacctgagcctggaattccccgcc
taccgcagcaatgtgcaggccctcaacggcgtgtcgctgcacgtcaacccgggggaaatc
gtcggcgtggtcggcgaatccggctcgggcaagtcggtgaccgccatgctcagcctgcgg
ctgctgcccgagcgcagctaccgcatcacctccggcagcctgagcctgctgggccgcgac
atgctcgccaccccggaaaaacagctgctgcagatccgcggccgcgatgcggcgatgatc
ttccaggagccgatgaccgccctcaacccgacccggcgcatcggccggcagatgctcgac
gtgatcatccatcaccagcgcctgagccaggaacaggcccgggccaaggccatcgacctg
ctgcgcgacatgcacatcgccgaccccgagcaggtgctgcaggcctaccccttcgagctg
tccggcggcatgcgccagcgggtgatgatcgccctggcgttttcctgcgacccgcagttg
ctgatcgccgatgaacccaccaccgccctggacgtgaccgtgcagcgccaggtgctgctg
ttgctgcgcgagaaagcccggcaacggggcaccgcgatcctcctgatcacccacgacatg
gcggtggtctcgcagttctgcgaccgggtctatgtgatgtacaccggcgccgtggtggag
caaggcagtactgcccaggtcatgctcgacccgcaacacccctacacccgcggcctgctc
agcggcctgccggagcaagtgcgccccggcgagccgctgctgaccattcccgggcaggtg
cccaaccttgctcacctgcccggcggctgcaccttccgcgagcgctgcagccaggccatg
gcggtgtgtgcccaacggccgccgctgcattcgatcaacgccagccagcagcacaagagt
gcctgctggctggctgccccggagtccgcccaatga
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