Pseudomonas protegens Pf-5: PFL_4135
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Entry
PFL_4135 CDS
T00249
Symbol
peaR
Name
(GenBank) sigma-54 dependent transcriptional activator PeaR
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfl03000
]
PFL_4135 (peaR)
Transcription factors [BR:
pfl03000
]
Prokaryotic type
Helix-turn-helix
Other families
PFL_4135 (peaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA
DUF134
HTH_1
HTH_28
HTH_7
HTH_20
HTH_22
Mga
HTH_23
PAS_9
AAA_7
HTH_50
HTH_29
HTH_11
AAA_16
HTH_17
Phage_CP76
Motif
Other DBs
NCBI-ProteinID:
AAY93396
UniProt:
Q4K951
LinkDB
All DBs
Position
complement(4800760..4802664)
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AA seq
634 aa
AA seq
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MTLIKTIKGEQQHEARLARERLHLEGQIPDGVLRAEIDASWRRSLSHGVHFGSQHQLTLE
SSASLEVLLASNRLLLDAAIPAIDYLSQHQGKDGMIILANADATILAIEGRADRLKDSGV
QDITLGACWSEATRGTNALGTALVEARPTLIDCGEHYLDRLSHFSCTSVPIQCPQGEILG
VLDLTREGPLGRAQDSTALLAMAVSQIEARVFHATYPEQIVLAFHSRRQYLESPWQGLLA
LSLGGQILAVSGQACQLLNTPRAALVGRRCEEFLGGDGLQLLARLQQGAVGSLQTAKGEL
FYKALRAPQPALNLHRAPRSAPKAAAMPQDLEALAGGNSRYARTLRMARQGLANDLPVLL
LGETGTGKEVLARALHRAGSRAEKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRGGMI
GRLQQAHGGTLFLDEIGDMPLALQARLLRVLQDRKVAPLGAGEEQDIDIALICATHRDLK
QQVQDKAFREDLFYRVNGISVLLPALREREDLQPLVDSLLAKLGGAQVSLSDELRRLLAD
YHWPGNIRQLEMVLRTALALREDGECHIGLEHLPDSMLDDLNASARPQTGSIRENELELI
RSALDNHQGNVSAAADALGISRATLYRKLKQLRA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgactcttataaaaacaataaagggtgagcagcaacacgaagcccggctggcccgggaa
cggctgcacctggaaggccagatccccgacggggttctgcgtgcggaaatcgatgcctca
tggcggcgcagcctcagccatggcgtgcactttggcagccagcaccaactgaccctggaa
tccagcgccagcctcgaagtgctgctggccagcaaccgcctgttgctggacgcggcgatc
ccggccatcgactacctgagccagcatcagggcaaggacgggatgatcatcctggccaat
gccgacgccaccatcctggcgatcgaaggccgcgccgaccgtctcaaggacagcggcgtg
caggacatcacccttggcgcctgctggagcgaagccacccgcggcaccaacgccctgggc
acggccctggtggaggcccggccgaccctgatcgactgcggcgagcactacctggaccgt
ctcagccatttctcctgcacctcggtgcccatccagtgcccccagggcgagattctgggc
gtgctcgacctgacccgcgaaggccccctgggccgggcccaggacagcaccgcgctgctg
gccatggcggtcagccagatcgaagcccgggtgttccatgccacctacccggagcagatc
gtcctggccttccacagccgccggcaatacctcgaatcaccgtggcaggggctgctggcc
ctgagcctgggcgggcagatcctcgcggtcagcggccaggcctgccagttgctcaacacc
ccgcgcgcagccctggtgggccggcgctgcgaagagttcctggggggcgatggcctgcaa
ctgctcgcacgcctgcaacagggcgccgtgggcagcctgcaaaccgccaagggcgagctg
ttctacaaggccctgcgggcgccgcagccagcgctcaacctgcatcgcgcgccacgcagc
gctccgaaagccgcagccatgccccaggacctggaagccctggccgggggcaacagccgc
tacgcccgcaccttgcgcatggcccgtcagggcctggccaatgacctgccggtgttgcta
ctgggcgaaacgggcaccggcaaggaagtcctggcccgggccctgcaccgcgccggcagc
cgcgccgagaaaccctttgtcgcagtcaactgcgcggcgatccccgaaggcctgatcgag
tcggaactgttcggctatcgcgaaggcgccttcaccggctcgcgtcgtggcggcatgatc
gggcgcctgcaacaggcccacggcggcaccctgttcctcgatgagatcggcgacatgccc
ctggccctgcaagcccgcctgctgcgcgtgctgcaggaccgcaaggtggcgcccctgggg
gccggcgaagaacaggacatcgacatcgccctgatctgcgccacccaccgcgacctcaag
cagcaggtgcaggacaaggcttttcgcgaagacctgttctaccgggtcaacggcatcagc
gtgctgttgccggccctgcgcgaacgcgaagacctgcagcccctggtggacagcttgctg
gccaagctcggtggcgcacaggtgagccttagcgatgagctgcgtcggctgctggcggac
taccactggccgggcaatatccgccagctggagatggtcctgcgcacagccctggccctg
cgcgaagacggtgagtgccacatcggcctggagcacctgcccgacagcatgctcgacgac
ctcaatgccagtgcccgaccgcagaccgggagcatccgcgagaatgagctggagctgatc
cgcagtgccctggacaaccaccagggcaatgtctcggcggcagcggacgctctgggcatc
agccgcgcgaccctgtaccgcaagctcaaacagttgcgcgcctga
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