Pseudomonas protegens Pf-5: PFL_4140
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Entry
PFL_4140 CDS
T00249
Symbol
mrdA_1
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00550
Peptidoglycan biosynthesis
pfl01100
Metabolic pathways
pfl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PFL_4140 (mrdA_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFL_4140 (mrdA_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfl01011
]
PFL_4140 (mrdA_1)
Enzymes [BR:
pfl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PFL_4140 (mrdA_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PFL_4140 (mrdA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AAY93401
UniProt:
Q4K946
LinkDB
All DBs
Position
complement(4807864..4809756)
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AA seq
630 aa
AA seq
DB search
MPEAIPIKDHEKESRLVNKRLLACAVLVVAITCALVARMYFLQVVEFDYHSTVSENNRVH
VLPITPTRGLIYDRNGVVLADNRPSFNLTITRERTTDLKGELDTVVDLLHLPPEDRTLFD
KEMKQARHPFVPVTLFYELTEEQIAVLAVNEYRLPGLDVEAQFVRHYPLGAHFAHSIGYV
GRINEKEAKTLDSVEYRGTQSIGKTGIEKFYEAELHGHVGYEEVETNAQGRVMRVLKHTD
PIPGKSIVLSLDIKLQEAAEEALGDRRGSVVALDPATGEVLAMVSKPSFDPNLFVTGISF
KEYAALHDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDSGVVTASTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESPGLMPSQAWKRATRRQPWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL
AKTIDGVAPVDEHPMPNILLKNPRDWDQVNHGMQMVMHDPRGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYDRLKTRERNRDNALFVGFAPAEHPQIVISVMIENGEAGGRVAGPVVR
QIMDAWLLDQNGHLKPQYAAPAKAPGDPHV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagcgattccgatcaaggaccacgagaaagaaagccgcctggtcaacaaacgg
ctgctggcctgtgccgtattggtggtggccatcacctgcgccctggtggcgcggatgtat
tttctgcaagtggtggagttcgactaccactccaccgtttccgagaacaaccgcgtccat
gtgctgccgatcactcccacccgggggctgatctacgatcgcaacggagtggtcctggcg
gacaaccgccccagcttcaacctgacgatcactcgcgaacgcaccaccgacctcaagggc
gagctggacaccgtggtcgatctgctgcacttgcccccggaagaccgcacgctgttcgac
aaggagatgaagcaggcccgtcatcccttcgtccccgtgaccctgttctatgagctcacc
gaagagcagatcgccgtgctcgcggtcaacgaataccggttgcccggcctggacgtggaa
gcccagttcgtccgccactatcccctgggcgcacactttgcccactccatcggttacgtc
gggcggatcaacgagaaagaagccaagaccctggactcggtggagtaccgtggcacccaa
tccatcggcaagaccggcatcgagaaattctacgaagccgaactgcacggccatgtcggt
tatgaggaagtagaaaccaacgcccagggccgggtgatgagagtgctcaagcacaccgat
ccgatccctgggaagagcatcgtcctgagcctggacatcaagctccaggaagccgctgag
gaggccctgggcgatcgccgtggttccgtggtggctctggacccggccaccggcgaagtc
ctggccatggtcagcaagccaagtttcgaccccaacctgttcgtcaccggcatcagcttc
aaggaatacgctgcgctgcacgactccatcgaccggcccctgttcaaccgagtgctgcga
ggcctctacgcgccgggctccaccatcaagccggaagtggcgattgccggcctcgatagc
ggcgtggttaccgcttcgacccgggtcttcgatccgggctattaccaactgccggacttc
gaccacaagtaccgcaactggaaccacagcggcgatggctgggtggacatggacgcagcg
atcatgcgttccaacgacacctacttctatgacctggcgcacaagctcggcatcgaccgc
ctgcacgactacatggcgatgttcggtctgggcgagaaggtctctctggacatgttcgaa
gagtctcccggcctgatgccctcccaggcctggaaacgcgccacccgtcgccagccatgg
ttcccgggggaaaccgtgatcctcggcatcggccagggctatatgcaagtcacgccgctg
caactggcccaggccaccgcgctgattgccaacaagggcgtgtggaaccgtccgcacctg
gccaagaccatcgatggcgtggccccggtggacgagcatccgatgcccaacatcctgctg
aagaatccccgtgactgggatcaggtcaaccacggcatgcagatggtgatgcacgatccc
cgcggtatcgcccgcgccgcggcagccggggcgcagtaccgcatcgccggcaagagtggt
acggcccaggtggtggcgatcaagcagggcgagcgctatgaccgtctcaagacccgcgag
cgcaaccgtgacaacgccctgttcgtgggcttcgccccggcggagcatccacagatcgtg
atttcggtgatgatcgagaacggcgaagccggtggtcgggtggccggccccgtggtgcgg
cagatcatggatgcctggctactggaccagaacggccacctcaagccgcagtacgcggcc
ccggccaaggcccctggcgatccccacgtctga
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