Pseudomonas protegens Pf-5: PFL_4243
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Entry
PFL_4243 CDS
T00249
Name
(GenBank) sensor histidine kinase/response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl02020
Two-component system
pfl02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFL_4243
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFL_4243
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pfl01001
]
PFL_4243
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfl02022
]
PFL_4243
Enzymes [BR:
pfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PFL_4243
Protein kinases [BR:
pfl01001
]
Histidine kinases
Other
PFL_4243
Two-component system [BR:
pfl02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
PFL_4243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_2
CHASE8
Baculo_PEP_C
DUF4164
SMP_2
Motif
Other DBs
NCBI-ProteinID:
AAY93499
UniProt:
Q4K8U8
LinkDB
All DBs
Position
4939240..4941561
Genome browser
AA seq
773 aa
AA seq
DB search
MDIKFTNRLSYKQARLTVLVGFILGTALSLLQIGIDYASEDASINREIQSLLEISHNPAS
RIAYNIDAELAQELTLGLLRSPAIIRAQLIDNNNTLLANVERPPQQSRYRAISDFLFGAD
RQFEDRLYLSHLPEESLGTLHLDVDTYAFGSRFLRRAEVTLINGFARSLILTGILLALFY
VMLTKPLVRVIRELSSRDPRSPKQAKLDFPHGHENDEVGVLVKVANQQFDIMATEIQQRR
NAENRLTEYLGQLENIVSARTTELKASNARLSQSNEELEIARRTALDMAQARAAFLANMS
HEIRTPLNGLLGMIALSLDSPLNPEQRQQLSIAHDSGKVLVELLNDILDMSKFDAGQLEL
ERIPFDLGVLVEDTANLLSQNAAASVELACLIAPDFPALVLGDPTRVRQIVSNLLSNALK
FTRFGRVDVRLSTLGDGVRIEICDTGIGIAQEAQVRIFQPYTQAGAGITRQYGGTGLGLA
LTYNLCEAMDGRLSISSEVGFGSQFCADLPLPCHTPAAPPPALAGKIIAITEAGSGLAEL
LASLLPSWGLSYQRCDIEDSLAGLDPDLLITDCPECLFGLRPAIRAPILLVTAYGSFLPS
EEANALAPLQQQARPLARNALYQTLRRSLLGETITLNDAQLEMPVQRRRADILLVEDNPV
NQLVAKGMLSKLGCAVTVAAHGAEALNQLELHRFDLVLMDCNMPVMDGYEASRQIRRSGR
WPDLPIIALTANAMPEERERCRAAGMSDYLAKPFRREELIALLDLWVPTTTKL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaagttcaccaaccgcctgtcctataaacaggcccggctcaccgtgctggtg
ggtttcattctggggaccgcgctcagtctgctgcaaatcggcatcgattatgccagcgaa
gacgcctccatcaatcgtgaaatccaatcgctgctggaaatcagccacaatccggcctcg
cgcatcgcctacaacatcgacgccgagctggcccaggaattgaccctgggcctgctgcgc
tccccggcgatcattcgcgcgcaattgatcgacaacaacaataccctgctggccaacgtc
gaacggccaccgcaacagagccgctatcgggccatcagcgacttcctgttcggcgccgat
cgccagttcgaggatcgcctgtatctgagccacctgccggaggagtccctcggcaccctg
cacctggatgtggatacctacgccttcggcagccgtttcctgcggcgtgccgaagtcacc
ctgatcaacgggttcgcccgcagcctgatcctcaccgggattctcctggcgctgttctac
gtgatgctgaccaagcccctggtgcgggtgatccgcgagctcagcagccgcgacccgcgc
agcccgaaacaggccaagctggactttccccatggccacgagaacgacgaagtcggggtg
ctggtcaaggtggccaaccagcagttcgacatcatggccaccgagatccagcagcggcgc
aacgccgagaaccgcctgaccgaatacctcgggcagctggagaacatcgtctcggcccgc
accaccgagctcaaggccagcaatgcccggctcagccagtccaacgaggaactggagatc
gcccggcgcactgccctggacatggcccaggcgcgggcggcgtttctggccaacatgagt
cacgagattcgcaccccgctcaatggcctgctggggatgatcgcgctgtccctggacagc
ccgctgaaccccgagcagcgccagcagctgtcgattgcccatgactccggcaaggtcctg
gtggaattgctcaacgatattctcgacatgtccaagttcgacgccgggcaactggagctg
gagcgaattcccttcgatctcggggtactggtggaggacaccgccaacctgctgtcgcaa
aacgccgcggccagcgtggagctggcctgcctgatcgccccggacttccccgccctggta
ctgggggacccgacccgagtgcggcagatcgtcagcaacctgctgtccaacgccctcaag
ttcacccgtttcggccgcgtcgatgtgcgcctgagcaccctgggcgacggagtgcgcatc
gagatctgcgacaccggcatcggcatcgcccaggaagcccaggtgcgcatcttccagccc
tatacccaggccggcgccggcatcactcgccaatacggaggcaccggcctgggcctggcc
ctgacctacaacctctgcgaagccatggacggccgcctgagcatcagttcggaagtcggc
ttcggcagccagttctgcgccgacctgccgctgccctgccacactccggccgccccgccg
ccggcgctggccgggaagatcatcgccatcaccgaggccggcagcggcctcgccgagctg
ctggccagcctgctgcccagttggggcctgagctatcagcgctgtgatatcgaggattcc
ctggccggcctcgaccccgacctgctgatcaccgactgcccggaatgcctgttcggcctg
cgcccggcgatccgcgcgccaatcctgctggtgaccgcctatggcagcttcctgcccagc
gaagaggccaacgccctggcaccgctgcaacagcaggcccggcccctggcgcgcaatgcg
ttgtatcagaccctgcgacgctcgttgctgggggaaaccatcaccctcaacgacgcccag
ctggaaatgccggtgcagcggcgccgggcggacattctgctggtggaggacaacccggtg
aaccaactggtggccaagggcatgctgagcaagctcggctgcgcggtgaccgtggccgcc
catggcgccgaagccctcaaccagttggagctgcatcgtttcgatctggtgctgatggac
tgcaacatgccggtcatggatggctacgaagccagccggcagatccggcgcagcgggcgc
tggccggatctgccgatcatcgccctgactgccaacgccatgcccgaggaacgcgaacgc
tgccgcgccgccggcatgagcgactacctggccaaaccgttccgtcgcgaagaactgatc
gccctgctcgacctctgggtgccgactacgacaaagctttga
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