Pseudomonas protegens Pf-5: PFL_4314
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Entry
PFL_4314 CDS
T00249
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfl03032
]
PFL_4314 (gyrA)
03400 DNA repair and recombination proteins [BR:
pfl03400
]
PFL_4314 (gyrA)
Enzymes [BR:
pfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PFL_4314 (gyrA)
DNA replication proteins [BR:
pfl03032
]
Prokaryotic type
DNA Topoisomerases
PFL_4314 (gyrA)
DNA repair and recombination proteins [BR:
pfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PFL_4314 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AAY93569
UniProt:
Q4K8M7
LinkDB
All DBs
Position
complement(5015182..5017851)
Genome browser
AA seq
889 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGREGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VMTMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDEGEYITTMLPVEEYTEGHYIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLAEGQKLISMLIPEEGSQILTASERGFGKRTAIGEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEIEGEEFEGEEGAEFEGAVLDAVADTDEAAEGQQADAAGEEESQD
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtaatcgtcgggcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcaccggcgtgtgctgtacgcgatgagcgagctcggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcacccgcac
ggtgataccgcggtgtacgacaccatcgttcgtatggcccagccattctccctgcgctac
ctgctggtagacggccagggtaacttcggttcggtcgacggcgacaacgcggcggccatg
cgatacaccgaagttcgcatgaccaagctggcgcacgagctgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgagatgatcccggcggtcatgccg
accaagatccccaacctgctggtcaacggttccagcggtatcgccgtgggcatggcgacc
aacattccgccgcacaacctcggtgaagtcatcgatggttgcctggcgctgatcgacaat
cccgagctgactgtcgacgagctgatgcagtacatccccggcccggatttcccgaccgcg
gcgatcatcaacggtcgcgaaggcatcatcgaggcctatcgcaccggccgtggccgcatt
tatatgcgtgcccgctcgatcatcgaagacattgacaaggttggcggccgccagcagatc
gtcatcaccgagctgccttaccaactgaacaaggcgcggttgatcgagaagatcgccgag
ctggtgaaagagaagaaactcgaaggcatcactgaactgcgcgatgagtccgacaaggac
ggtatgcgcgtcgtgatcgagctgcgtcgtggcgaagtgcctgaggtgatcctcaataac
ctctacgcccagacccagctgcaagcagtgttcggcatcaacatcgtggcgctgatcgac
ggccgtccgcggatcctcaatctcaaggatctgctggaagccttcgttcgtcaccgtcgt
gaagtcgttacccggcgtaccgtgttcgagctgcgcaaggctcgtgagcgtggccacatc
cttgaaggccaggccgttgccctgtccaacatcgatccggtgatcgccctgatcaaggcc
tcgccgacgccgtcggaagccaaggaagcgctgatcagcaccccttgggagtccagcgcg
gtcatgaccatggtcgagcgtgccggtgcggattcctgccgtccggaaaaccttgatccg
caatacggtctgcgcgacggcaagtacttcctgtccccggaacaggcacaagccattctg
gagttgcgcctgcaccgcctgactggcctggagcacgaaaagctgctggccgagtaccag
gagatcctcaaccagatcggcgagctgatccgcatcctcaatagcgccacgcgcctgatg
gaagtgatccgcgaagagctggaagtgatccgcgccgaatacggcgacgtgcgccgcacc
gagattctcgatgcccgcctcgacctgaccctgggtgacatgatcccggaagaagagcgt
gtggtgaccatttcccacggcggctacgccaagacccagccgctggctgcctaccaggcc
cagcgtcgtggcggtaaaggcaagtcggccacaggcgtcaaggatgaggactacatcgct
cacctgctggttgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctgaagacttatgaaattcctgaagcatcccgtgccgcacgcggtcgtccgctg
gtcaacctgctaccgctggatgagggtgaatacatcaccaccatgctgccggtagaggag
tacaccgaaggtcactacatcttcatggcgaccgccaacggcaccgtgaagaagaccccg
ctggagtccttcagccgccagcgcagcgtgggcctgatcgctctggagctggacgaaggc
gacgtgctgatcagtgccgccatcaccgatggcgagcgtgaagtcatgctgttctccgac
ggaggcaaggtcactcgcttcaaggagtccgacgtgcgcgccatgggccgtaccgctcgc
ggtgtgcgcggcatgcgcctggcggaaggtcagaagctgatttccatgctgattccggaa
gaaggcagccagatcctcaccgcctccgagcgtggtttcggcaagcgtaccgccattggc
gagttccccgagtacaagcgtggcggccagggcgttatcgccatggtcagcaacgagcgt
aacggtcgcctggttggcgcggtgcaggtgctggatggtgaggagatcatgctgatttcc
gatcagggcaccctggtgcgtacccgtgtcgacgaagtgtcgagcctgggccgtaacact
caaggcgtgactctgatcaagctggccagtgatgaaaccctggtgggcctggagcgggtg
caggagccatcggaaatcgagggcgaagagttcgaaggtgaagagggtgctgaattcgag
ggagccgtgctggatgcggttgccgataccgatgaggcagccgaaggccaacaggcagac
gccgcaggcgaagaagagtcgcaagactaa
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