Pseudomonas protegens Pf-5: PFL_4463
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Entry
PFL_4463 CDS
T00249
Symbol
ttcA
Name
(GenBank) putative tRNA 2-thiocytidine biosynthesis protein TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfl03016
]
PFL_4463 (ttcA)
Transfer RNA biogenesis [BR:
pfl03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
PFL_4463 (ttcA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP_bind_3
NAD_synthase
DacZ_P
QueC
Motif
Other DBs
NCBI-ProteinID:
AAY93714
UniProt:
Q4K882
LinkDB
All DBs
Position
complement(5173156..5173980)
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AA seq
274 aa
AA seq
DB search
MGTLTVNQNKLQKRLRRQAGEAVADFNMIEEGDKVMVCLSGGKDSYTMLDVLLHLQKVAP
IKFEIVAVNMDQKQPGFPEHVLPAYLKELGIEYHIVEKDTYSVVKELIPEGKTTCSLCSR
LRRGTLYTFADEIGATKMALGHHRDDIVETFFLNMFYNGSLKAMPPKLLADDGRNVVIRP
LAYCSEKDIQAYSDLKQFPIIPCNLCGSQENLQRQVVKEMLQEWERKTPGRTESIFRGLQ
NVIPSQLADRNLFDFTSLRIDDSATPRFVNVVNL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgggcactcttacggtcaaccagaacaaactgcagaaacgtcttcgccgccaggcgggc
gaagcggtcgccgatttcaacatgatcgaagagggcgacaaggtcatggtctgcctgtcc
ggcggcaaggacagctacaccatgctcgacgtgctgctgcacctgcagaaggtggcgccg
atcaagttcgagatcgtcgcggtgaacatggaccagaaacagccaggctttcctgagcac
gtgctgccggcctacctcaaggaactggggatcgagtaccacattgtcgagaaggacacc
tattcggtggtcaaggagctgatcccggaaggcaagaccacctgctcgctgtgctcgcgc
ctgcgtcgcggcaccctgtacaccttcgccgacgaaataggcgccaccaagatggccttg
ggtcaccaccgcgacgatatcgtcgagaccttcttcctcaacatgttctacaacggttcg
ctcaaggccatgccgcccaagctgctggccgatgatgggcgcaacgtggtaatccgcccg
ctggcctactgcagcgagaaggacatccaggcctattccgacctcaagcagttcccgatc
atcccgtgcaacctctgcggttcccaggagaacctgcaacgccaggtggtcaaggagatg
cttcaggaatgggagcgcaagactccagggcgtaccgaaagcatcttccgcggcctgcag
aacgtgatcccctcgcaactggcggaccgcaatctgttcgacttcaccagtctgcgcatc
gacgacagcgccacgccgcgtttcgtcaatgtggtgaacctctga
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