Pseudomonas protegens Pf-5: PFL_4599
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Entry
PFL_4599 CDS
T00249
Symbol
fadD_3
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00061
Fatty acid biosynthesis
pfl00071
Fatty acid degradation
pfl01100
Metabolic pathways
pfl01212
Fatty acid metabolism
pfl02024
Quorum sensing
pfl04146
Peroxisome
Module
pfl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PFL_4599 (fadD_3)
00071 Fatty acid degradation
PFL_4599 (fadD_3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFL_4599 (fadD_3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFL_4599 (fadD_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfl01004
]
PFL_4599 (fadD_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfl04147
]
PFL_4599 (fadD_3)
Enzymes [BR:
pfl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PFL_4599 (fadD_3)
Lipid biosynthesis proteins [BR:
pfl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PFL_4599 (fadD_3)
Exosome [BR:
pfl04147
]
Exosomal proteins
Exosomal proteins of breast milk
PFL_4599 (fadD_3)
Exosomal proteins of breast cancer cells
PFL_4599 (fadD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AAY93846
UniProt:
Q4K7V0
LinkDB
All DBs
Position
complement(5307807..5309495)
Genome browser
AA seq
562 aa
AA seq
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MQPDFWNDKRPAGVPNEIDLGAFKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERYSA
AFAGYLQSHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLVVVNTNPLYTAREMRHQFKD
CGARALVYLNIFGQKVQEVLGDTDIQFLIEARMGDMMPSAKGWLINTVVDKVKKMVPAYH
LPQAISFKSALRLGRGQSIKPLQVGHDDVAVLQYTGGTTGLAKGAMLTHGNLVANMQQAR
ACLGQHGPDGHTQWREGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIGGFI
KELKKWRFSALLGLNTLFVALMDHPDFKNLDFSNLKLTNSGGTALVKATAERWQKLTGCR
ITEGYGLTETSPVACTNPYGERSRLGTVGLPVPGTTLKIIDDQGVELPLGERGELCIKGP
QIMKGYWNKPEATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGIPDERSGEAVKLFVVPREAGVSLEELKAYCKENFTGYKVPKHIV
LRDSLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgataagcgccccgctggcgtccccaacgagatcgacctg
ggggccttcaagtcggtgatcgaggtgtttgagcgttcctgcaagaaattcgctgatcgc
ccggccttcagcaacatgggcgtgaccctcacctacgccgagctggaacgctacagcgcg
gccttcgccggttatctgcaaagccataccgatctggttccgggagaccgtattgcggtg
cagatgcccaacgttttgcagtacccgatcgcggtattcggagccttgcgcgcagggctg
gtggtggtcaataccaacccgctgtacaccgcgcgggagatgcgccaccagttcaaggat
tgcggggcccgggccctggtctacctgaacatcttcggccagaaggtccaggaagtgctg
ggggataccgatatccagttcctgatcgaggcccggatgggcgacatgatgcccagcgcc
aagggctggctgatcaataccgtggtggacaaggtcaagaagatggtgccggcctaccac
ctgccccaggccatttccttcaagagtgccctgcgcctggggcgtggccagagcatcaag
ccgctgcaggtgggccacgacgatgttgcggtgctgcagtacaccgggggcaccaccggc
ctggccaagggcgcgatgctgacccacggcaacctggtggccaacatgcagcaggcgcgg
gcctgcctcggccagcatgggcccgacggccacacccagtggcgcgaaggccaggaggtg
atgatcgcgccgctgccgctgtaccacatctatgccttcaccgcgaactgcatgtgcatg
atggtgaccggcaaccacaacgtgctgatcaccaacccgcgggacatcggcggcttcatc
aaggagctgaagaagtggcgtttttctgcgctactggggctcaacacgctgtttgtggca
ctgatggatcacccggatttcaagaacctggatttttccaatctgaagctcaccaactct
ggcggcacggccctggtcaaggctaccgccgagcgctggcagaagctgaccggctgccgg
atcaccgaaggctacgggctgaccgaaacctcgccggtggcctgtaccaacccctatggc
gagcgttcgcggttgggcaccgtcggcctgccggtaccgggcaccaccttgaagatcatc
gatgaccagggcgtcgagctgccgctgggcgagcggggcgagctgtgcatcaagggcccg
cagatcatgaagggctactggaacaaacccgaggccaccgccgaagtgctggatgccgag
ggctggttcaagtccggtgatatcgcggtgatcgatccggacggtttcgtgcgcattgtc
gatcgcaagaaggacatgatcatcgtctcgggtttcaacgtgtacccgaacgagatcgag
gatgtggtcatggctcacccgaaagtcgccaactgtgcagtcatcggcataccggacgag
cgttccggcgaggcggtgaagctgtttgtggtgccgcgtgaggcgggggtcagccttgaa
gagctcaaggcctactgcaaagagaatttcaccggctacaaggtgcccaagcacattgtg
ctgcgtgactctttgccgatgaccccggtgggcaagatcctgcgccgcgagttgcgcgat
atcgcttga
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