Pseudomonas protegens Pf-5: PFL_4632
Help
Entry
PFL_4632 CDS
T00249
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFL_4632 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfl03400
]
PFL_4632 (alkA)
Enzymes [BR:
pfl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PFL_4632 (alkA)
DNA repair and recombination proteins [BR:
pfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFL_4632 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AAY93879
UniProt:
Q4K7R7
LinkDB
All DBs
Position
complement(5345294..5346163)
Genome browser
AA seq
289 aa
AA seq
DB search
MIHHLPYQGAYDWPAMLGFLRARAIEGLEVVQGDTYARTFALAGGQGILSVCPGPAGHLQ
VQLQGAEQAQLPQVLARLRRQFDLDADLSLINRHLARDPLLAPLLAARPGLRVPGAWDGF
ELAIRAVLGQQITVQGAIRLAGKLVAVHGRLLASPDPQWPGLTHLFPTPQVLSTANLADL
GMPRSRARTLSAVAQALLDDPLLFEPRASLQQGVERLLQLPGIGDWTAQYIALRQLRESD
AFPAADVGLFNAMARLQGLRPNARQLLARAEAWRPWRGYAAQHLWAAMG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgattcatcacctgccctaccagggcgcctacgactggccggcgatgctgggctttctc
agggcccgcgccatcgaaggcctggaggtggtgcagggcgatacttatgcccgcaccttc
gcgctggcgggcgggcaaggcatcttgagtgtctgcccggggcctgcaggccatttgcag
gtgcagttgcagggggccgagcaggcccagctgccccaggtgctggcgcgcttgcgccgg
caattcgatctggacgcggacctgtccctgatcaaccgccatctggcccgtgatccgctg
ctcgcaccgttgctggcggcacgcccgggcctgcgagtacccggggcctgggacggtttc
gagctggccattcgcgccgtgctgggccagcagatcaccgtgcagggcgcgatccgcctg
gcgggcaagctggtggcggtgcatggccggttgctggccagtcccgacccgcagtggccc
ggtttgacccacctgtttcccactccccaggtgctgtccactgccaacctggccgacctg
ggaatgccccgcagccgggcacgcacgctgtctgccgtggcccaggccttgctcgacgat
ccactcctgttcgaacccagggccagcctgcaacagggggtggagcgcctgttgcaattg
ccgggaatcggcgattggaccgcgcaatatatcgccctgcgccagttgcgcgagagcgat
gcctttccggcggcggacgtaggcctgttcaacgctatggcacgtctgcaggggctgcgg
cccaatgcccgccaactgctagcccgggccgaggcctggcggccgtggcgcggttatgcg
gcgcagcatttatgggcggccatgggctga
DBGET
integrated database retrieval system
