Pseudomonas protegens Pf-5: PFL_4783
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Entry
PFL_4783 CDS
T00249
Name
(GenBank) conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfl03400
]
PFL_4783
DNA repair and recombination proteins [BR:
pfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PFL_4783
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
TrwB_AAD_bind
AAA_30
AAA_16
T2SSE
CbiA
AAA_10
AAA_7
AAA_6
AAA_19
SRP54
nSTAND3
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
AAY94013
UniProt:
Q4K7B9
LinkDB
All DBs
Position
complement(5522294..5523781)
Genome browser
AA seq
495 aa
AA seq
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MPDSSQLVIGAGLDGLPIAQAMRLANRHGLVAGATGTGKTVTLQRLAEAFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKVAERIAGMPWLKHQPQAYPVTLWDIHGQSGHPLRTTLSEMGP
LLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDNPQLLGDDAALMTT
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPAADGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFAGTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPGDLPDNVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDAQAVLTEL
GIGEALVGTLQDKGTPEMVQRVLVAPPQSRIGPLTEAERQALIASSPLLGRYDKPIDRES
AYEVLLGRKELAPQDQQPSGKAAAEEPSLADRAGEFLGTAAGQALKSAMRQAANQLGRQL
VRGLMGSLLGGSKRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcatcgcaactcgtaatcggtgccggcctcgatggcctgccgatcgcccag
gccatgcgcctggccaaccgccacggtctggtggcgggcgccacgggcaccggcaagact
gtcaccctgcagcgcctggcagaagccttcagtgatgccggggtggcggtatttgccgca
gacatcaaaggcgacctctgtgggctgggtgctgcgggcaacccccagggcaaggttgcc
gagcggatcgccggcatgccctggctcaagcatcaaccacaggcctatccggtgaccctg
tgggatatccatgggcaaagcggtcatcctctgcgcaccaccctgagcgaaatgggcccg
ctgctgctgggcagtttgctggaactcaccgacagccagcagtcggcgctctatgcggcg
ttcaaggtcgctgatcgcgaaggcctgttgctgctcgacctgaaggacctcaaggcgctg
ctcaaccacctcaaggacaacccgcagctgctcggggacgatgctgcgttgatgactacc
ggctccagccaggcgctgttgcggcgcctggcgaccctggagcagcagggcgccgaagca
ttgttcggtgagccggcgttgcagctggaggacattctgcagccggccgccgatggtcgt
gggcggattcatctgctcgatgccagccgcctggtgcatgaggcgccgaaagtctatgcg
accttccttttatggctgctggccgagctgttcgagcaactgccggagcggggcgatgcg
gacaagccgctgctggcgctgttcttcgacgaagcgcacctgctgttcgccggtactccc
aaggccttgcaggaccggctggagcaggtggtgcgactgattcgctccaaaggtgtggga
gtgtatttcgttacccagtcgcccggggacctgccggacaatgtcctggctcaattggga
ttgcgtatccagcatggcttgcgggcctttactgccaaggaacagaagtccctgcgcgcc
gtggcggatggtttccgtcccaaccccgccttcgatgcgcaggcggtactgaccgagctg
ggcatcggcgaagcgctggtgggcaccttgcaggacaagggcacgccagaaatggtccag
cgggtactggtggcgccgccgcagtcgcggatcgggccgctgaccgaggccgagcgccag
gccctgatcgccagttcgccgctgctggggcgctatgacaaaccgatcgaccgcgaatca
gcctatgaagtgttgctggggcgcaaggagctggcaccgcaggatcagcagccttctggc
aaagcagcggctgaagagcccagcctggccgaccgggcgggtgagttccttggcacggct
gccgggcaggcattgaagtcggccatgcgccaggcggctaatcaattgggacggcaactg
gtgcggggcttgatgggttccctgctcggcggcagcaagcggcgctga
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