KEGG   Pseudomonas protegens Pf-5: PFL_4783
Entry
PFL_4783          CDS       T00249                                 
Name
(GenBank) conserved hypothetical protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
pfl  Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfl03400]
    PFL_4783
DNA repair and recombination proteins [BR:pfl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     PFL_4783
SSDB
Motif
Pfam: HerA_C DUF87 AAA_22 FtsK_SpoIIIE ResIII TrwB_AAD_bind AAA_30 AAA_16 T2SSE CbiA AAA_10 AAA_7 AAA_6 AAA_19 SRP54 nSTAND3 Hydrolase
Other DBs
NCBI-ProteinID: AAY94013
UniProt: Q4K7B9
LinkDB
Position
complement(5522294..5523781)
AA seq 495 aa
MPDSSQLVIGAGLDGLPIAQAMRLANRHGLVAGATGTGKTVTLQRLAEAFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKVAERIAGMPWLKHQPQAYPVTLWDIHGQSGHPLRTTLSEMGP
LLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDNPQLLGDDAALMTT
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPAADGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFAGTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPGDLPDNVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDAQAVLTEL
GIGEALVGTLQDKGTPEMVQRVLVAPPQSRIGPLTEAERQALIASSPLLGRYDKPIDRES
AYEVLLGRKELAPQDQQPSGKAAAEEPSLADRAGEFLGTAAGQALKSAMRQAANQLGRQL
VRGLMGSLLGGSKRR
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgcctgactcatcgcaactcgtaatcggtgccggcctcgatggcctgccgatcgcccag
gccatgcgcctggccaaccgccacggtctggtggcgggcgccacgggcaccggcaagact
gtcaccctgcagcgcctggcagaagccttcagtgatgccggggtggcggtatttgccgca
gacatcaaaggcgacctctgtgggctgggtgctgcgggcaacccccagggcaaggttgcc
gagcggatcgccggcatgccctggctcaagcatcaaccacaggcctatccggtgaccctg
tgggatatccatgggcaaagcggtcatcctctgcgcaccaccctgagcgaaatgggcccg
ctgctgctgggcagtttgctggaactcaccgacagccagcagtcggcgctctatgcggcg
ttcaaggtcgctgatcgcgaaggcctgttgctgctcgacctgaaggacctcaaggcgctg
ctcaaccacctcaaggacaacccgcagctgctcggggacgatgctgcgttgatgactacc
ggctccagccaggcgctgttgcggcgcctggcgaccctggagcagcagggcgccgaagca
ttgttcggtgagccggcgttgcagctggaggacattctgcagccggccgccgatggtcgt
gggcggattcatctgctcgatgccagccgcctggtgcatgaggcgccgaaagtctatgcg
accttccttttatggctgctggccgagctgttcgagcaactgccggagcggggcgatgcg
gacaagccgctgctggcgctgttcttcgacgaagcgcacctgctgttcgccggtactccc
aaggccttgcaggaccggctggagcaggtggtgcgactgattcgctccaaaggtgtggga
gtgtatttcgttacccagtcgcccggggacctgccggacaatgtcctggctcaattggga
ttgcgtatccagcatggcttgcgggcctttactgccaaggaacagaagtccctgcgcgcc
gtggcggatggtttccgtcccaaccccgccttcgatgcgcaggcggtactgaccgagctg
ggcatcggcgaagcgctggtgggcaccttgcaggacaagggcacgccagaaatggtccag
cgggtactggtggcgccgccgcagtcgcggatcgggccgctgaccgaggccgagcgccag
gccctgatcgccagttcgccgctgctggggcgctatgacaaaccgatcgaccgcgaatca
gcctatgaagtgttgctggggcgcaaggagctggcaccgcaggatcagcagccttctggc
aaagcagcggctgaagagcccagcctggccgaccgggcgggtgagttccttggcacggct
gccgggcaggcattgaagtcggccatgcgccaggcggctaatcaattgggacggcaactg
gtgcggggcttgatgggttccctgctcggcggcagcaagcggcgctga

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