Pseudomonas protegens Pf-5: PFL_4838
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Entry
PFL_4838 CDS
T00249
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFL_4838 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfl03019
]
PFL_4838 (groL)
03110 Chaperones and folding catalysts [BR:
pfl03110
]
PFL_4838 (groL)
03029 Mitochondrial biogenesis [BR:
pfl03029
]
PFL_4838 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfl04147
]
PFL_4838 (groL)
Enzymes [BR:
pfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PFL_4838 (groL)
Messenger RNA biogenesis [BR:
pfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PFL_4838 (groL)
Chaperones and folding catalysts [BR:
pfl03110
]
Heat shock proteins
HSP60 / Chaperonin
PFL_4838 (groL)
Mitochondrial biogenesis [BR:
pfl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PFL_4838 (groL)
Exosome [BR:
pfl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PFL_4838 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PFL_4838 (groL)
Exosomal proteins of breast cancer cells
PFL_4838 (groL)
Exosomal proteins of colorectal cancer cells
PFL_4838 (groL)
Exosomal proteins of bladder cancer cells
PFL_4838 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AAY94068
UniProt:
Q4K764
LinkDB
All DBs
Position
complement(5582414..5584057)
Genome browser
AA seq
547 aa
AA seq
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MAAKEVKFGDSARKKMLTGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKGLSKPCADSKAIAQVGTISANSDNSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDGPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGNAKRVILSKENTTIIDGAGVEADIQARVTQIRQQVADTSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALQGINDLKGDNADQDVGIAVLRRAIEAPLRQIVANSGDEPSVVVDKVKQGAGNFGYNA
ATSEYGDMIEMGILDPTKVTRSALQAASSIGGLILTTEAAVAEIVEDKPAAGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgattccgcccgcaagaaaatgctcactggtgtc
aacgttctggctgacgcagtaaaagcgaccctgggcccgaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgttgccaaagaaatc
gagctgaaagatcgcttcgaaaacatgggcgcgcagctggtcaaagacgttgcctcccgt
gccaacgatgacgctggcgacggcaccaccaccgctaccgttctggctcagtcgatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctgaaacgcggtatc
gacaaggcgaccatcgccatcgtcaaagaactgaagggtctgtccaagccatgcgctgac
tccaaggccatcgctcaggtcggcaccatctccgccaactccgacaactccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtctgtcgtagaaggcatgcaattcgaccgcggctacctg
tccccttacttcatcaacaagccggacaccatggtcgccgaactcgacggcccgctgatc
ctgctggtggacaagaagatctccaacatccgcgaaatgctgccagtgctggaagccgtt
gccaaagccggccgcccactgctgatcgtggctgaagacgttgaaggcgaagccctggcg
actctggttgtgaacaacatgcgtggcatcgtcaaagtcgctgccgtcaaggcacctggc
ttcggcgaccgtcgcaaggccatgctgcaggacatcgccgttctgaccggcggtaccgtc
atctccgaagagatcggcctgagcctggaaagcaccaccctggagcacctgggtaacgcc
aagcgcgtgatcctgtccaaagaaaacaccaccatcatcgacggtgctggcgttgaagcg
gacatccaggctcgtgtgactcagatccgtcaacaagtcgccgacacttcgtccgactac
gaccgtgaaaaactgcaagagcgtctggccaagctgtccggcggcgttgcagtgatcaag
gttggcgctggttccgaagttgaaatgaaagagaagaaggcccgcgttgaagacgccctg
cacgctacccgtgcagccgttgaagaaggcgtggtacctggcggtggcgtagccctgatc
cgtgctctgcaaggcatcaacgacctgaaaggcgacaacgccgaccaggacgtgggtatc
gctgttctgcgtcgcgctatcgaagctccactgcgccagatcgttgccaactccggtgac
gagccaagcgttgtcgtggacaaggtcaagcagggtgccggcaacttcggctacaacgct
gctaccagcgaatacggcgacatgatcgaaatgggcatcctggatccaaccaaggtaacc
cgttccgcactgcaagcagcttcgtccatcggcggtctgatcctgaccaccgaagccgct
gttgctgaaatcgtggaagacaagcctgcagctggcggcatgccagacatgggcggcatg
ggtggcatgggcggcatgatgtaa
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