Pseudomonas protegens Pf-5: PFL_4888
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Entry
PFL_4888 CDS
T00249
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
Organism
pfl
Pseudomonas protegens Pf-5
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
AAA_19
TIP49
AAA_22
OKR_DC_1_N
AAA_30
AAA_18
AAA_2
APS_kinase
nSTAND3
AAA_7
MCM
Motif
Other DBs
NCBI-ProteinID:
AAY94118
UniProt:
Q4K714
LinkDB
All DBs
Position
5632116..5633513
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AA seq
465 aa
AA seq
DB search
MTHNLLVVDDEPKLCDLLSSALSQNGIQVFTAGNGLHALKVLEQEDIDLVISDWRMPGMD
GPQLLGEIKQRYPQLPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVSKALQF
RDILKDNQRMRAELAEHQQIDSLVGDSPAFRRVLQAVDSVRESNATILLTGESGTGKEMV
ARAIHKHGNRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLF
LDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDL
YYRLNVFPIPLPALRERVEDIALLARHFAHSLGATAGKRISGFSPEALQAMASYAWPGNI
RELQNCVERATIVATGQVIEEKDLPGYLFGPQAQGTESSAAISVGPQVPSDLEAALAEVE
KAYILAALQQSNGVQAAAAQLIGISERSFWYRLKKLGIQVDKIVR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgcataacctgctggtggtcgatgacgagccgaaactctgcgacctgctgtcctcg
gccctgagccagaacggcatccaggtattcaccgcaggcaacggcctgcacgcgctcaag
gtgctggagcaggaagacatcgacctggtgatcagcgactggcgcatgcccggcatggac
gggccgcagttgctgggggaaatcaagcagcgctacccgcagttgccggtgatcgtgatg
accgcctacagcacggtgaagaatgccgtgcagtccatgcgcaacggcgcctacgactac
atcgccaaacccttcgacatcgacgaactggacatcaccgtcagcaaggccctgcagttt
cgcgacatcctcaaagacaaccagcgcatgcgcgccgagctcgcagagcatcagcagatc
gacagcctggtgggcgacagcccggccttccgtcgggtgctgcaagccgtggattcggtg
cgcgaaagcaacgccaccatcctcctgaccggggaaagcggcaccggcaaggaaatggtc
gcccgggccatccacaagcacggcaaccgggccgacaagccctttgtcgcggtcaattgt
gcggccattcccgagggtctgctggaaagcgagatgttcggccaccgcaagggcgccttc
accggcgccgtggcggaccgggtcggacgtttccagcaagccgacaagggcaccctgttc
ctcgacgaagtcggcgacatgcccctggccctgcaggccaagatcctgcgtgccctgcag
gagcgagtgatcgagccggtgggcgatccgcgggagcgcaaggtggatgtgcgggtgatc
gccgccaccaacaagaacctgctggaagcggtggccaacaaggaatttcgcgaagacctg
tactaccgcctgaatgtattcccgatccccttgccggcactgcgcgaacgggtcgaggac
atcgccctgctggcccggcactttgcccacagcctgggtgccaccgccggcaagcgcatc
agcggcttcagccccgaagccctgcaggccatggccagctacgcctggccggggaatatc
cgcgaactgcagaactgcgtggagcgggccaccatcgtcgccaccggccaggtcatcgaa
gaaaaggacctgccagggtatctgttcggcccccaggcgcagggcacagagagcagcgca
gccatcagtgtcggcccgcaagtgcccagcgacctggaagcggccctggcggaagtggaa
aaagcctacattctcgccgccctgcagcagagcaacggtgtccaggcggcagcggcgcag
ttgatcggtatttccgagcgcagcttctggtaccggctgaagaaactcggcatccaggtg
gacaagatcgttcgctga
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