Pseudomonas protegens Pf-5: PFL_4953
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Entry
PFL_4953 CDS
T00249
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFL_4953 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfl01007
]
PFL_4953 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfl03016
]
PFL_4953 (hisS)
Enzymes [BR:
pfl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
PFL_4953 (hisS)
Amino acid related enzymes [BR:
pfl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PFL_4953 (hisS)
Transfer RNA biogenesis [BR:
pfl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PFL_4953 (hisS)
Prokaryotic type
PFL_4953 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
tRNA-synt_2d
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
AAY94182
UniProt:
Q4K6V0
LinkDB
All DBs
Position
complement(5707689..5708978)
Genome browser
AA seq
429 aa
AA seq
DB search
MSKSLQAIRGMNDILPEQTPLWRYFEGTVARLLDNYGYKQIRMPIVEFTELFKRSIGEVT
DIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLEHGITGGGQVQKLWYIGPMFRHERPQK
GRYRQFHQIGCEVFNLDGPDIDAELIVLTWRLWGELGIRDAVKLELNSLGTAEARARYRD
ALVEFLSARMDKLDEDSQRRLKTNPLRVLDTKNPDTQAVLVDAPKLADYLDEESRVHFEG
LKARLDAAGIPYVINPKLVRGLDYYSKTVFEWVTDKLGAQGTVCAGGRYDGLVEQMGGKP
TSGVGFAMGIERLVLLLETLEQVPEEISRQVDVYLCAFGEAAELAALALSERVRDQLPNL
RLQINAGAGSFKSQFKKADKSGALYALILGDDELAQQVVGFKPLRGQGEQQSIAWDALAA
HLATCVVQG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagtctctgcaagccattcgtggcatgaatgacatcctgcccgagcagacgccc
ctgtggcgttatttcgagggtactgtggcgcgcctgctggataactacggttacaagcag
atccgcatgccgatcgtcgagttcaccgagctgttcaagcgctccatcggtgaagtgacc
gacatcgtcgaaaaagagatgtacaccttcgaagatcgcaacggcgactccctcaccctg
cgtccggaaggcaccgcggcgtgcgtgcgtgcggtgctcgagcacggcatcactggcggt
ggccaggtgcagaaactctggtacatcggcccgatgttccgtcacgagcgcccgcagaaa
ggccgctatcgccagttccaccagatcggttgcgaggtattcaacctcgacggtccggac
atcgatgctgagctgatcgtgttgacctggcgcctgtggggcgagctgggcatccgtgat
gcggtcaagctcgaactcaacagcctgggtaccgccgaagcgcgcgcgcgctatcgcgac
gcgctggtggagttcctgtcggcgcgcatggacaagctggacgaagacagccagcgccgc
ctgaagaccaacccgctgcgggtgctggataccaagaacccggacactcaagccgtgctt
gtggatgcgcccaagctggccgactacctggacgaagagtcccgcgtgcacttcgaaggc
ctcaaggcccgcctggatgctgcgggtatcccctatgtgatcaaccccaagctggtgcgc
gggctggattactacagcaagaccgttttcgaatgggtcaccgacaagctcggtgcccag
ggcactgtctgtgccggtggccgttacgatggcctggtggagcagatgggcggcaagcct
acctcgggcgttggctttgccatggggatcgagcgtctggtgctgctgctggaaaccctg
gagcaggtcccggaagagatctcgcgccaggtcgacgtttacctctgcgccttcggtgag
gccgccgaactggccgctctggcgctgagcgagcgtgttcgcgatcaattgccgaacctg
cgtctgcagatcaatgccggtgctggcagcttcaagagccaattcaagaaggccgacaag
agcggcgcgctgtatgcgctgatcctcggtgacgacgaactggcccagcaagtggtaggt
ttcaaacccctgcgtggccagggcgaacaacaaagcattgcctgggatgcactcgctgcg
cacctggccacctgcgtcgtgcagggttga
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