Pseudomonas protegens Pf-5: PFL_5000
Help
Entry
PFL_5000 CDS
T00249
Name
(GenBank) transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfl03000
]
PFL_5000
Transcription factors [BR:
pfl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFL_5000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
HTH_20
MarR_2
HTH_11
HTH_IclR
HTH_30
HTH_5
HTH_23
HTH_24
HTH_Tnp_ISL3
HTH_50
Mga
Motif
Other DBs
NCBI-ProteinID:
AAY94228
UniProt:
Q4K6Q4
LinkDB
All DBs
Position
5760037..5760972
Genome browser
AA seq
311 aa
AA seq
DB search
MITDLPPLNAVRAFAAAARHLSFSRAAEELHVSHSAVSRHIKLLEEHLGVLLFERRIRQS
VLTPAGQAFHEQVSVALAQIANAAASLRRGAALRKVTVNVRPSFAVRWLIPRLPQFMALY
PQIQPEVVTSTLLPDPAKETFDLVIRRGRSGWATTLQPQRLLEDEILVVAAPSLLHSTAL
NSPDDLPRHTLLVSRTRASDWQKWLEHCGLKPLRTSPTLHFDHMHFVLQACVDGLGLALC
PASLLAKDLASGRLICPLPDLRQPLTRYYYALASDAAPEAQVFIDWMLAQIHQDAMDHQA
QQLAGNAGQRP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgatcactgacctgccgcccctgaacgccgtccgcgcctttgccgccgctgctcgccac
ttgagtttcagccgcgccgccgaagaactgcatgtgagccacagcgcggtgagccgccat
atcaagttgctggaagagcacctgggggtgctgctgttcgagcggcgcatccgccagtcg
gtgctcacccctgccgggcaagccttccatgagcaggtcagcgtggccctggcccagatc
gccaatgccgccgcctccctgcgccgcggcgcagccctgcgcaaggtcaccgtcaatgtg
cgaccgtccttcgcggtgcgctggctgattccccgcttgccgcagttcatggcgctgtac
ccgcagatccagccggaggtggtgaccagcaccctgctccccgaccccgccaaggaaacc
ttcgacctggtgattcgccgtggccgctcgggctgggcaaccacgctgcaaccccaacgc
ctgctggaagacgaaatcctggtggtggcagcgccgtcgctgttgcacagcacagcactg
aacagccccgatgatctgccgcgacataccttgctggtcagccgcacccgcgccagcgac
tggcagaagtggctggagcactgcggcctgaaaccgctgcgtacctcgccaaccttgcat
ttcgaccatatgcacttcgtgctccaggcctgcgtcgacgggctgggcctggcgctgtgc
ccggcctcgttgctggccaaggacctggccagcggccgcctgatctgccccttgccggac
ctgcgccagcccctgacccgctattactacgcgctggccagtgatgcggcccccgaagcc
caggtgtttatcgactggatgctggcgcagattcaccaggacgccatggatcatcaggca
caacagcttgcgggcaatgcgggccaacgcccataa
DBGET
integrated database retrieval system
